| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_1447 |
|---|
| Symbol | |
|---|
| ID | 5380571 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009667 |
|---|
| Strand | - |
|---|
| Start bp | 1531444 |
|---|
| End bp | 1532301 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640834106 |
|---|
| Product | outer surface protein |
|---|
| Protein accession | YP_001369993 |
|---|
| Protein GI | 153008778 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3637] Opacity protein and related surface antigens |
|---|
| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTGCA CTTCCGCCAT TGCCATCGTG GCTATCAGTC TGATGGCGGG ATCAGGAGCG
GCGTTTGCCG CCGACATAAT TGCAGACCCT GTTATTGAAC CCATGCCGGA ACCGGTTAAT
TCGTCCGGCT GGTATATTCG TGGCGATCTC GGTTACAATT TCAAATCCAG CACAGATGGC
GACTGGAGCT TCTGGAACCA GTTCGATCCG CCCTATCGCG GCATTGACGA CACGCTGCGC
TACGATGATT TCGACCTCAA GGCAGGCGCA ACTTACGGCG TGGGTGTCGG TTACCGCTTC
ACCGACATGT TCCGCGCCGA CGCAACGCTC GACTTCTTCC GTGCAGGCAT AAACGGCCGC
ACCGCCTGCC CAAGCTATGT GAAATCTGCC AAGGGCTTCA ATCCGGTCGA GGACAACTGC
AACTACGAGG ATTCCTCGAC AGCCAATATC TGGACGGCCA TGGCCAACGC CTATGTCGAC
CTGCCGCGTG TGGGACCTGT GACGCCTTAT CTCGGCGCAG GTCTTGGCGC CGCCTATGTG
CAATATGACG ACTGGAAAAC CCACGAAGTC TGCGCAGGCT GCACCTATTC CAGCGAAAAG
GACGGCCTCG ACAGCTGGCG CTTCGCAATG GCTCTCATGG CCGGTGTCAG CTACGATCTG
ACCGAGCAGC TCAAGCTTGA TGTCGGTTAC CGCTATATGC GTATCAATGG TGGCAAAGCC
TACGGTTTTG ACGCAGCCGA TCGCAGCACC AACCCTTACG GCAATGCCGA AGGACCGGGC
GCCACGGGAA CGCAGGCCAA AGACAATGGC TTCAACATGC ACACGATCCG CGCCGGTCTT
CGCTACGAAT TCCGTTAA
|
|---|
| Protein sequence | MKCTSAIAIV AISLMAGSGA AFAADIIADP VIEPMPEPVN SSGWYIRGDL GYNFKSSTDG
DWSFWNQFDP PYRGIDDTLR YDDFDLKAGA TYGVGVGYRF TDMFRADATL DFFRAGINGR
TACPSYVKSA KGFNPVEDNC NYEDSSTANI WTAMANAYVD LPRVGPVTPY LGAGLGAAYV
QYDDWKTHEV CAGCTYSSEK DGLDSWRFAM ALMAGVSYDL TEQLKLDVGY RYMRINGGKA
YGFDAADRST NPYGNAEGPG ATGTQAKDNG FNMHTIRAGL RYEFR
|
|---|
| |