| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_1444 |
|---|
| Symbol | |
|---|
| ID | 5380437 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009667 |
|---|
| Strand | - |
|---|
| Start bp | 1528275 |
|---|
| End bp | 1529525 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640834103 |
|---|
| Product | D-amino acid dehydrogenase small subunit |
|---|
| Protein accession | YP_001369990 |
|---|
| Protein GI | 153008775 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.492956 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGATCA CCATTCTCGG CAGCGGCGTC ATTGGCGTTA CGACCGCTTA TTACCTCGCC
AAGCTCGGTC ACGAGGTAAC CGTTGTCGAC CGCGAAGAAG GCCCCGCACT GGAAACGAGC
TTTGCCAATG CCGGTCAGGT TTCGCCGGGT TACGCGTCGC CCTGGGCCGC GCCCGGCATT
CCGTTCAAGG CCGCGAAATG GCTGTTCCAG AAGCACGCGC CACTTGTTTT GCGTCCGACT
TGCGATCCGG TTCAGTATAG CTGGCTCCTG CAGATGCTCG CGAACTGCAC CGACAGCCGT
TACAAGGTCA ACAAGACCCG CATGGTGCGC GTCGCCGAAT ATGCGCGCGA TTGCCTTGTC
GATCTGCGCA AGGAAACCGG CATCGAATAC GACCAGCGCA TGCAGGGCAC GCTCCAGCTT
TTCCGCGAGC AGTACCAGCT CGACGGTATC GGCAAGGATA TTGAGGTACT GCGTCAGGAT
GGCGTGCCGT TCGAAGTCCT CGACCGCGAG GGTTGCGCCA AGGTAGAACC GGCACTTGCC
CGCGTGAAGG ACAAGTTCGT CGGTGGCTTG CGTCTTCCGC ATGACGAAAC CGGCGACTGC
TTCAAGTTCA CCAATGCGCT GGCAAAGATT GCCGAAGGAC TCGGTGTAAA ATTCCGCTTC
GGCGTCAACA TCAAGTCGTT ACTGATGTCC GGCGGCAAGG TTTCCGGCGT CGAGACCTCC
GAGGGTGTCC TGACCGCCGA CCGTTATGTC GTCGCTCTTG GCAGCTATAC GCCTGCGCTC
GTCAAATCGC TTGGCCTTAA CGCCCCGATC TATCCGGTGA AGGGTTATTC CATCACAGCA
CCGATTGTCG ACGAGGATCG CGCTCCGGTT TCGACCGTTC TCGATGAGAG CTACAAGATT
GCGATCACCC GTCTTGGCGA CCGCATCCGC GTTGGCGGTA TGGCGGAAGT CTCGGGCTTC
ACCACGGACC TACCTGCCGC GCGGCGCGCA ACGCTCGATT TGTCGGTAAC GGACCTGTTC
CCCGGCGGCG ATCTGAAAGC GGCAACCTTC TGGTCCGGCC TGCGCCCGAT GACACCGGAT
TCCACGCCGA TCATCGGTGC AACGCGCTAC GACAACGTGT TCATAAATGC CGGTCACGGA
ACGCTCGGCT GGACGATGTC GTGCGGTTCC GGCAAATTGC TCGCCGACCT TATTTCCGGC
AACAAGCCGG ATATCCGGGC CGACGATCTC GGTATTTCCC GCTACGAATA G
|
|---|
| Protein sequence | MQITILGSGV IGVTTAYYLA KLGHEVTVVD REEGPALETS FANAGQVSPG YASPWAAPGI
PFKAAKWLFQ KHAPLVLRPT CDPVQYSWLL QMLANCTDSR YKVNKTRMVR VAEYARDCLV
DLRKETGIEY DQRMQGTLQL FREQYQLDGI GKDIEVLRQD GVPFEVLDRE GCAKVEPALA
RVKDKFVGGL RLPHDETGDC FKFTNALAKI AEGLGVKFRF GVNIKSLLMS GGKVSGVETS
EGVLTADRYV VALGSYTPAL VKSLGLNAPI YPVKGYSITA PIVDEDRAPV STVLDESYKI
AITRLGDRIR VGGMAEVSGF TTDLPAARRA TLDLSVTDLF PGGDLKAATF WSGLRPMTPD
STPIIGATRY DNVFINAGHG TLGWTMSCGS GKLLADLISG NKPDIRADDL GISRYE
|
|---|
| |