Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oant_1441 |
Symbol | |
ID | 5380408 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ochrobactrum anthropi ATCC 49188 |
Kingdom | Bacteria |
Replicon accession | NC_009667 |
Strand | - |
Start bp | 1525247 |
End bp | 1525936 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640834100 |
Product | RNA polymerase sigma factor |
Protein accession | YP_001369987 |
Protein GI | 153008772 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTGCAA AAACAGCGTT ACCCGCCACC TCTCCAACAT TTCAGGATGA TCTTGTCCTC GCCCAGTGCG CAAAAATGCA CGATCTGGAA GCGCTGCGCA AAATCATGCA GACCAACAAT CAGCGGCTCT ATCGTCTGGC CCGCGGCATC GTGCGCAACG ACAGCGAAGC GGAAGATGTG GTTCAGGAGA CCTATTTTCT GGCTTTCAGG AGTCTTGATC GCTTTCGCGG CCAATCCAGC CTGACCACGT GGCTATCCCG TATTGCAATT CACGAAGCCC TCGGTCGTCT GCGCAAAACC CGGAAGGTCG AGAAGCTTCT TGAGACCACA CCCGACACAA ACAATATCAT CCCGTTTCCA TCCGACATGA GCGTGAATGA CCCCGAACGC AGTTTTGCGC AGCGCCAGAT ATTGCAGCTG GTCGAACAGG CAACGGATAA TCTGCCGGAA ATTTTTCGCC TCGTATTCGT CGCACGGGTC ATTGAAGGTT TGAGCGTGGA TGAAACAGCC GAATTGTTGA ATCTGCGCCC GCAAACCGTA AAGACACGTC TTCACCGCGC CCGATATTTG TTACGAAAAC AGCTGGACGA GAAAATCGGC CCTGTATTGC TGGATGCCTT TCCCTTCGCA GGCAAACGCT GCGAGCGGAT TATAACTGCC GTTTTGGCGC GGCTGGACGA ACTGACTTAA
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Protein sequence | MRAKTALPAT SPTFQDDLVL AQCAKMHDLE ALRKIMQTNN QRLYRLARGI VRNDSEAEDV VQETYFLAFR SLDRFRGQSS LTTWLSRIAI HEALGRLRKT RKVEKLLETT PDTNNIIPFP SDMSVNDPER SFAQRQILQL VEQATDNLPE IFRLVFVARV IEGLSVDETA ELLNLRPQTV KTRLHRARYL LRKQLDEKIG PVLLDAFPFA GKRCERIITA VLARLDELT
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