Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oant_1284 |
Symbol | |
ID | 5380150 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ochrobactrum anthropi ATCC 49188 |
Kingdom | Bacteria |
Replicon accession | NC_009667 |
Strand | + |
Start bp | 1359947 |
End bp | 1360798 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640833941 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001369830 |
Protein GI | 153008615 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.32576 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATACTT CTTTCAATCT CGATCTTTTG CGGGCCTTTG TGGCTGTTGT CGACAGCCGT AGTTTTACGG CTGCGGCCTT GCAGCTGCAC TCGACCCAAT CGACCATAAG CCAGAAGATC ATGCGGCTGG AGGAAGCTGT TGGACAGGCG CTTCTGGAAC GTGCCCGGCA TGATGTGCGC CCGACGGATG CAGGCGAAAA GTTGCTGGGC TATGCGCGCC GTATTCTGCA CTTGCATGAC GAGGCGGCAG CCGCGATGAC CGGCACAGCA CTTGCTGCCG TGTTCCGCCT CGGCCTGCCG GAGGATTTCG CCTCACGGCT GGTTACGCCT GCGCTGGCGC GTTTCATGCG CACACATCCC AACACGAAAC TCGAAGTGAC GAGCGGTCTC AGCCGTGACT TGCAGAAAGG TTTCGAAACC GGTGAGTTTG ACCTTGTCAT GGTGAAACAA AAACGTGGCG AAACGGTTGG GACCATGCAC TGGCCGGAGC CGCTGTCCTG GCTCGATAGC GCCGATTTTC CCGTTTCCCA CGTTGATCCG CTGCCACTCG TCGTGTTTCC ACCGAACGGG CTTTATCGCA GCGACATGAC GGAGGCTCTC GATCGGGTGG GCAGGCGCTG GCATGTGGTT TTCACCAGCT CCAGTCTGGC GAGTATTCAA AGTGCGGTCG CCGAGGGGCT GGGTGTCAGC CTGCTGCCGA CGCGTGTTGC GCTTCCCGGT CATCAGGTGG TGCCTGCCGC AGCAGGATTG CCGTTCGTCG AGCCGATGGA AATTGTCATC CGGCACATGG ACAACGGCCC CGACCAGATC CGTCAGCTTG CCGAAATGCT GGCGGAGATT GTCGGAGACT GA
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Protein sequence | MNTSFNLDLL RAFVAVVDSR SFTAAALQLH STQSTISQKI MRLEEAVGQA LLERARHDVR PTDAGEKLLG YARRILHLHD EAAAAMTGTA LAAVFRLGLP EDFASRLVTP ALARFMRTHP NTKLEVTSGL SRDLQKGFET GEFDLVMVKQ KRGETVGTMH WPEPLSWLDS ADFPVSHVDP LPLVVFPPNG LYRSDMTEAL DRVGRRWHVV FTSSSLASIQ SAVAEGLGVS LLPTRVALPG HQVVPAAAGL PFVEPMEIVI RHMDNGPDQI RQLAEMLAEI VGD
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