Gene Oant_1248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOant_1248 
Symbol 
ID5380871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOchrobactrum anthropi ATCC 49188 
KingdomBacteria 
Replicon accessionNC_009667 
Strand
Start bp1317277 
End bp1317849 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content57% 
IMG OID640833898 
ProductRNA polymerase sigma factor 
Protein accessionYP_001369794 
Protein GI153008579 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.830354 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACACAG CACCCGGTCC GTCGGTTGAG AGTAATGCAC AGTTCAAGCG AGAGCTTCTG 
TCATCGCTGC CGAGCCTGCG CGCCTTTGCG GTGTCGCTGA TTGGCCAGCA CGACAAGGCA
GATGATCTCG TACAAGATAC GATCATGAAA GCATGGGCCA AGCAGGAGTC CTTTGAAATG
GGGACCAATA TGAAGGCCTG GCTTTTCACC ATCCTGCGCA ATGAATTCTA CACGCAGATG
CGCAAGCGTG GCCGCGAAGT GCAGGACACG GATGGCGTGT TCAGCGAACA GCTCGCCGTG
CATCCTTCGC AATATGGCAC GCTTGATCTG CAGGATTTCC GCGCAGCATT AGAGCAATTG
CCCGACGATC AGCGCGAAGC GATCATTCTG ATCGGCGCTT CGGGCTTTGC CTATGAGGAA
GCTGCGGAAA TCTGCGGCTG TGCTGTCGGC ACGATCAAGA GCCGTGTCAG CCGTGCTCGC
ACGCGCTTGC AGGAAATCCT CAAGATCGAA GGCGAAGGCG ACTACGGTCC GGATGCCGAT
TCATCGCGGG CGACCTTGAG AAGCTTTGCA TAA
 
Protein sequence
MNTAPGPSVE SNAQFKRELL SSLPSLRAFA VSLIGQHDKA DDLVQDTIMK AWAKQESFEM 
GTNMKAWLFT ILRNEFYTQM RKRGREVQDT DGVFSEQLAV HPSQYGTLDL QDFRAALEQL
PDDQREAIIL IGASGFAYEE AAEICGCAVG TIKSRVSRAR TRLQEILKIE GEGDYGPDAD
SSRATLRSFA