Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oant_0953 |
Symbol | sdhA |
ID | 5379807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ochrobactrum anthropi ATCC 49188 |
Kingdom | Bacteria |
Replicon accession | NC_009667 |
Strand | + |
Start bp | 987958 |
End bp | 989802 |
Gene Length | 1845 bp |
Protein Length | 614 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640833598 |
Product | succinate dehydrogenase flavoprotein subunit |
Protein accession | YP_001369503 |
Protein GI | 153008288 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup [TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.643609 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAGTG CAGTAAACAA CGCGGCCGAT GCTGCCGTGG CAAGCAAATA TACCTATGTC GATCACAAGT TCGACGTGGT GGTGGTCGGA GCTGGCGGCG CGGGCCTACG CGCAACGCTC GGCATGGCCG AGCAAGGCCT GAAGACGGCT TGCATCACCA AGGTTTTCCC GACCCGTTCG CATACGGTCG CAGCGCAGGG TGGCATCGCC GCTTCGCTCA AGAATATGGG CCCGGACAGC TGGCAGTGGC ACATGTACGA TACCGTCAAG GGATCGGACT GGCTCGGCGA CACCGATGCG ATGGAATATC TGGCGCGTGA AGCGCCTGCC GCCGTCTACG AACTGGAACA CTACGGTGTG CCTTTCTCGC GTACGGAAGA AGGCAAGATT TATCAGCGCC CGTTCGGCGG CCACATGCAG AATTTTGGCG ACGGTCCTCC GGTCCAGCGC ACCTGTGCTG CTGCCGACCG TACCGGCCAC GCTATCCTGC ATACGCTCTA TGGCCAGTCG CTCAAGAACA ACGCGCAGTT CTTCATCGAA TATTTCGCGC TCGATCTCAT CATGACTGAC GGTGTCTGCA CCGGCGTCGT GGCGTGGAAC CTTGATGACG GCACGATCCA TCGCTTCTCG GCCAAGATGG TGGTTTTGGC GACAGGCGGT TATGGCCGTG CCTATTTCTC GGCAACCTCT GCCCATACCT GCACCGGCGA TGGTGGCGGC ATGGTTGCAC GTGCCGGCCT GCCACTGCAG GACATGGAAT TCGTACAGTT CCATCCAACT GGCATCTATG GCGCAGGCTG CCTCATCACC GAAGGTGCGC GCGGCGAAGG CGGTTATCTG GTCAATTCCG AAGGCGAGCG CTTCATGGAG CGCTATGCCC CTTCGGCCAA GGACCTTGCC TCGCGTGACG TTGTCTCGCG CTGCATGACC ATGGAAATCC GTGCTGGCCG TGGCGTCGGC AAGGCCAAGG ATCACATCTT CCTGCATCTT GACCATCTCG ATCCGGCTGT TCTGCATGAA CGCCTGCCGG GTATTTCGGA ATCGGCCAAG ATTTTCGCAG GCGTCGATGT GACCAAGGAA CCGATCCCGG TTCTCCCGAC GGTTCACTAC AATATGGGTG GCATTCCGAC CAATTACTGG GGCGAAGTGT TGAACCCGAC CGAGGCTGAT CCAGACCGCG TACAGCCGGG CCTGATGGCT GTCGGCGAAG CGGGCTGCGC TTCGGTGCAC GGCGCAAACC GTCTCGGCTC CAACTCGCTG ATCGATCTGG TCGTGTTTGG CCGTGCGGCT GCAATCCGCG CCGGGCAGGT CATTGATCGC AAGTCGAAGA TTCCGGACCT CGACGTTACC GCCTGCGACA AGATCATGGA GCGCTTCGAT CGTCTGCGTT TTGCCAACGG CTCCCAGCCG ACCGCAGAAC TGCGCGAGAA GATGCAGCGT ACCATGCAGG AAGATGCCGC CGTATTCCGT ACGTCGGAAT CGCTCAAGCA AGGCGTCGAG CGCATGGAAA AGCTCTGGCA TGAACTGCCG GACATCAAGG TTACCGACCG TTCGATGATC TGGAACTCCG ATCTCGTCGA AACGCTTGAG CTGGAAAACC TGATGGCGAA TGCGCTGACG ACGGTTGTTT CCGCCGAAGC GCGCCAGGAA AGCCGCGGTG CCCATGCGCA TGAGGATTTC CCGGATCGCA ACGATGCCGT GTGGCGCAAG CACACCCTGT CCTGGCTGTC GCCGGATGGC AAGGTCAAGC TTGACTACCG TCCTGTCCAC CTCGATCCGT TGACGACGGA AGAGGAAGGC GGCATCAGCC TCGCCAAGAT TGCGCCGAAG AAGCGCGTTT ACTAA
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Protein sequence | MASAVNNAAD AAVASKYTYV DHKFDVVVVG AGGAGLRATL GMAEQGLKTA CITKVFPTRS HTVAAQGGIA ASLKNMGPDS WQWHMYDTVK GSDWLGDTDA MEYLAREAPA AVYELEHYGV PFSRTEEGKI YQRPFGGHMQ NFGDGPPVQR TCAAADRTGH AILHTLYGQS LKNNAQFFIE YFALDLIMTD GVCTGVVAWN LDDGTIHRFS AKMVVLATGG YGRAYFSATS AHTCTGDGGG MVARAGLPLQ DMEFVQFHPT GIYGAGCLIT EGARGEGGYL VNSEGERFME RYAPSAKDLA SRDVVSRCMT MEIRAGRGVG KAKDHIFLHL DHLDPAVLHE RLPGISESAK IFAGVDVTKE PIPVLPTVHY NMGGIPTNYW GEVLNPTEAD PDRVQPGLMA VGEAGCASVH GANRLGSNSL IDLVVFGRAA AIRAGQVIDR KSKIPDLDVT ACDKIMERFD RLRFANGSQP TAELREKMQR TMQEDAAVFR TSESLKQGVE RMEKLWHELP DIKVTDRSMI WNSDLVETLE LENLMANALT TVVSAEARQE SRGAHAHEDF PDRNDAVWRK HTLSWLSPDG KVKLDYRPVH LDPLTTEEEG GISLAKIAPK KRVY
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