Gene Oant_0817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOant_0817 
Symbol 
ID5379850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOchrobactrum anthropi ATCC 49188 
KingdomBacteria 
Replicon accessionNC_009667 
Strand
Start bp845131 
End bp848673 
Gene Length3543 bp 
Protein Length1180 aa 
Translation table11 
GC content60% 
IMG OID640833462 
Productdouble-strand break repair helicase AddA 
Protein accessionYP_001369368 
Protein GI153008153 
COG category[L] Replication, recombination and repair 
COG ID[COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) 
TIGRFAM ID[TIGR02784] double-strand break repair helicase AddA, alphaproteobacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGG CACCCATTAT CCCCGAAGAA ACGCTACGGG CACAGAGCAA CGCGGCAAAT 
CCGGCGGCTT CTGTCTGGGT GTCCGCCAAT GCGGGTTCCG GCAAGACCCA TGTTCTGACC
GAACGTGTTA TCCGCCTGCT GCTGGAGGGT ACTGATCCTT CCAAGATTCT CTGCCTTACC
TACACCAAGG CGGCTGCGGC GGTGATGCAG AACCGCGTGT TCATGCGGCT TTCAGAATGG
GCTGTCCTGC CTGACGAAGA ACTCGCCGAA CGTCTGAAGT CGCTTGAAGG CCGCAGACCG
AACGATGCTC GTCTTGCAGC AGCGCGACGG CTGTTCGCCC GTGCGCTCGA AACACCGGGC
GGGCTTAAAA TCCAGACCAT CCACGCTTTC TGCGAAGCGA TCCTGCACCA GTTCCCGCTT
GAGGCGAACA TTGCCGGTCA TTTCGAGATG ATGGATGATT TGATGCAGGC AGCCCTTGTC
GGCGAAGCAC GGCGCCAACT GCTCGAAACC GCGCATGGCG GCGGCGATAT TGATCTCGCA
GCGGCCTTTG CTGATGTTCT GCAGGCATCG GGCGAGATGG GGCTTCAATC GCTTCTGGAT
GAGGCCGTAA GCAGGCGCAA TGGCCTGCAG ACCTATATCG CCGAACTGGG CGTAGCGGCG
CATCGCAGCG AAGCTCTGCA CCGGGCTTTC CGCTTCGATC CGCAAACCAG CGAAGACGAT
CTCATCGCCG ATCTCTGGCC GATACCGGAA TTTTCCGACG ATGCGCTCGA GCTCATCATG
TCGATCCAGA AGGGTGCGTC GCGCGCGCAG GATTTTGCGC TGCAGCTCCG GCGTTTCGAA
AAGGTGACGA GCCAGCGTGA CCGCGAGGCC GTGTTGCGCG CCGCGTTTCT GAAAACTACT
GGCGAGCCGA AATCCGGTTC CTATGTCGGC TCGGCGGCGG TCAAGAAACT TCTGCCGGAT
TTCGAAGAGG ATTTTGACGC GGCAGCCGCG CGTGTCGAAC AGGGTCTTGA TCGGCTGAAG
GAATTGCGTC TGGTGCGGCT CAATCTGGCC GCGCTGACGC TGATCGACAA TCTGCTGCAA
CGCTATCACG ACCTGAAGCG TCAGCGCGGC CTGCTCGATT TCGAGGATCT CATTACCCGG
ACCGTGGCGC TGCTCGCCCG CAACGGGGCA GGGCAGTGGG TTCAGTACAA GCTCGATCGC
GGCATTGACC ATATTCTGGT CGACGAGGCG CAGGACACCA GCCCCGACCA GTGGCAGGTA
ATCCGCATGC TGTCGGAAGA GTTTTTCTCC GGCGTCGGCC AACGCAATAT CAGCCGCACG
CTTTTTGCCG TTGGTGACGA AAAACAGTCG ATCTATTCGT TCCAGGGTGC CGTGCCGGAG
GATTTCGCGG CGCAGGGGAG GTCGGTCAGT CTTCGTGCGG AAGATGCCGA GCTGAAGTTC
GAGCGCGTCA GCCTCAATTT CTCGTTCCGA TCCGCACCCG ATGTCTTGCA GGCGGTGGAC
GAGGTTTTTG CGAGACCCGA GGCCAATCGA GGCCTTGCAG GCGCAACGGT ACATGAAGCT
ATTCGTTCCG ATGCGCCGGG CGAGGTGGAA ATCTGGGATA TGCTGACGCC AGAAGTGGTG
GAAGAGCCGG ACGACTGGCG CGAGCCGGTC GATCATCTGG CAGCACCTGC CGTCCGGCTG
GCGGATCAGA TCGCGGCCAC TATTCGTCAC TGGCTGGATC GCGGCGAACC TATTCCGGGC
CAGAACCGGC GGATCATGCC GCGTGACATC ATGGTTCTGG TACGAAAGCG CGACCAGTTC
ATGCCTGCTT TGTCGCGGGC GCTGAAAAAC CTGTCCGTTC CGGTAGCAGG TGCAGACCGC
TTGCGGCTCA CCAGCCATAT TGCCATTCAG GACCTGATGG CACTCGGTCG TTTCGTGCTT
CAGCCTTCGG ACGATCTTTC GCTGGCATCG GTATTGAAAA GCCCGTTATT CGGCTGGGAT
GACGACCGGC TGTTCGAGCT TGCCCATCCG CGCGGTTCAG GCCTCACATT GTTCGAGCGG
CTTTATCAGG TCTCGCGCGG CGATGCTGCA CTGGCCGAGG TGCACAAGAC CTTGAGCCGC
TGGCGCAATA TGGCCGACAC GATGCCGGTG TTCGAGTTCT ATGCACGGAT ATTGAGCGCG
GACGGTGCGC GGCGAAAACT TCTGGCGAGG TTGGGGCCGG AGGCGGGCGA TATCATCGAC
GAATTCCAGA ATTATGCGCT TTCAGCCGAG CGTGCCGGTC TGCCCGGCCT GCAAGCCTAC
CTTGAAACAC TGGAAGCGGC ATCGCCGGAA ATCAAGCGTG AACTTGATCA GGGGCGCAAT
GAAGTGCGCA TCATGACTGT CCATGCCGCC AAGGGGCTGG AAGGGGCAGT GGTGTTTCTC
GTTGATCCGG GAAGTGCGGT CTGGACTGGC AGTCGTGCGC CAAAGCTCAT TCCTTTTGAC
TTTTCGAATG ATAGTCCGTC GGTGAAAGGC TATCTCTGGC AACCGAATGC CGGATACCAG
ACCGGCTTCA CGACCGCTCA GATCGAGAAG CTGAAAACGC GGGCGGAGGA AGAATATCGC
CGCCTGCTCT ATGTCGGCAT GACGCGCGCC GAAGACCGGC TCATCATCTG CGGCTATCGC
GGCACGCGTG AAAGCGGCGA AACATGGCAT CGCCTTGTCG AGGATGCGTT GGCCACCAAG
GCCGAGACAT TCGTGCACCC CGTGCTGAAA GTCGCCGCAA GGCGCTATCG CAACACACCG
CGCGGAATGG TCGATATTGC TGAGCAGGAT AGAACCGAAG ATCATGCGCT GCCATCATTT
CCAGATGAAT ATAGAGAGCC GATAAAGCCG GAAATCGGAC TGCCGCGACC GCTGGCGCCG
TCCGGCGCTT CTGCGCTGAT CGAAGCGGAT GAAGAACCGC CGCTCGATTC GTTTTCGCCC
GTTCTGGGAC CGGGCAATGG GACGCCAGCC TTTGCGTTGC GACGCGGCAC GGCGATCCAT
ATGCTGCTGC AATATCTGCC GGATGTCCCA CAGGATGGGC GTGAAACGCT GGCACGCGAC
TATCTTGGGC GGATTGCTGC CGACTGGCCG GAAACGGAGC GCCAGATTGC CTGGCAAAGC
GTCAGGACCA TTCTGGACGA TCCCACCTAT GCACCGGTCT TTGCGGAAGG CTCGCGCGGG
GAAGTTGCCA TCATGGGCAC GATCGAGCTT GGCGGGCGCG ATCATGCCGT GTCCGGTCAG
ATCGACCGCA TCAGTGTTGG CGAGGATCGT GTCCTGATCA TCGACTACAA GACCAATCGA
CCGCCACCGA AAACCATCGA GGCGGTTCCT TTCGCCTATC GGGCGCAGCT TGCGCTTTAT
CGCGAGTTGC TGGCCCCGCT CTATCCGGGG CGGATTGTCG AAACGGCGCT TCTGTTCACC
GAAGGTCCGT TTTTGATGCC GCTGCCGGAT GTGGTTCTGG ACGAAGCGCT GCAGTCTCTG
AAAGACTCTC AAGGAAAGGT GACGAACCAG AACTTGACGG ATGGCAGCAG ACGCGCCACA
TGA
 
Protein sequence
MKKAPIIPEE TLRAQSNAAN PAASVWVSAN AGSGKTHVLT ERVIRLLLEG TDPSKILCLT 
YTKAAAAVMQ NRVFMRLSEW AVLPDEELAE RLKSLEGRRP NDARLAAARR LFARALETPG
GLKIQTIHAF CEAILHQFPL EANIAGHFEM MDDLMQAALV GEARRQLLET AHGGGDIDLA
AAFADVLQAS GEMGLQSLLD EAVSRRNGLQ TYIAELGVAA HRSEALHRAF RFDPQTSEDD
LIADLWPIPE FSDDALELIM SIQKGASRAQ DFALQLRRFE KVTSQRDREA VLRAAFLKTT
GEPKSGSYVG SAAVKKLLPD FEEDFDAAAA RVEQGLDRLK ELRLVRLNLA ALTLIDNLLQ
RYHDLKRQRG LLDFEDLITR TVALLARNGA GQWVQYKLDR GIDHILVDEA QDTSPDQWQV
IRMLSEEFFS GVGQRNISRT LFAVGDEKQS IYSFQGAVPE DFAAQGRSVS LRAEDAELKF
ERVSLNFSFR SAPDVLQAVD EVFARPEANR GLAGATVHEA IRSDAPGEVE IWDMLTPEVV
EEPDDWREPV DHLAAPAVRL ADQIAATIRH WLDRGEPIPG QNRRIMPRDI MVLVRKRDQF
MPALSRALKN LSVPVAGADR LRLTSHIAIQ DLMALGRFVL QPSDDLSLAS VLKSPLFGWD
DDRLFELAHP RGSGLTLFER LYQVSRGDAA LAEVHKTLSR WRNMADTMPV FEFYARILSA
DGARRKLLAR LGPEAGDIID EFQNYALSAE RAGLPGLQAY LETLEAASPE IKRELDQGRN
EVRIMTVHAA KGLEGAVVFL VDPGSAVWTG SRAPKLIPFD FSNDSPSVKG YLWQPNAGYQ
TGFTTAQIEK LKTRAEEEYR RLLYVGMTRA EDRLIICGYR GTRESGETWH RLVEDALATK
AETFVHPVLK VAARRYRNTP RGMVDIAEQD RTEDHALPSF PDEYREPIKP EIGLPRPLAP
SGASALIEAD EEPPLDSFSP VLGPGNGTPA FALRRGTAIH MLLQYLPDVP QDGRETLARD
YLGRIAADWP ETERQIAWQS VRTILDDPTY APVFAEGSRG EVAIMGTIEL GGRDHAVSGQ
IDRISVGEDR VLIIDYKTNR PPPKTIEAVP FAYRAQLALY RELLAPLYPG RIVETALLFT
EGPFLMPLPD VVLDEALQSL KDSQGKVTNQ NLTDGSRRAT