Gene Oant_0005 details

Gene Information

• Locus tag: Oant_0005
• Symbol: recF
• ID: 5380476
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ochrobactrum anthropi ATCC 49188
• Kingdom: Bacteria
• Replicon accession: NC_009667
• Strand: +
• Start bp: 4338
• End bp: 5501
• Gene Length: 1164 bp
• Protein Length: 387 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 640832652
• Product: recombination protein F
• Protein accession: YP_001368565
• Protein GI: 153007350
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1195] Recombinational DNA repair ATPase (RecF pathway)
• TIGRFAM ID: [TIGR00611] recF protein

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAATACGC CTGAGCCTAA TCAAAGCCGC CCGGAACGTG TTTCGATCCG GCGGCTCAAG 
CTTGTGAATT TCCGCAATTA TGCGGAACTA TCACTGCCGC TTGGGCCCGG CCATGTCGTG 
CTGACTGGCG AAAATGGTTC CGGCAAGACC AATCTGATCG AAGCAATTTC CTTTCTGTCG 
CCGGGACGCG GCCTGCGCCG TGCTGCTTAT GACGATGTTG CCCGCGCAAA TTCGCTTGAT 
GGCTTTGCCA TTCATGCCGC GCTTGACTGT ATGATCTATG GCGAAGCTGA AATCGGCACC 
GGCACAGCAG GCGGCGGCGA GGGGGGGCGC AAGGTACGTA TCAACGGGAT TGCGGGTTCC 
GGCGACGACA TGCTCGACTA TGCGCGCATC CTTTGGGTGG TGCCGTCGAT GGATGGGCTT 
TTCACCGGAG GCGCTTCTGA TCGCCGGCGT TTCCTCGACC GTATGGTGCT TGCTATCGAT 
ACCGCTCACG GCAAGCGCGT GCTCGATTAC GAAAAAGCGA TGCGCAGCCG CAACCGCTTG 
CTGAACGATG GCAGTAATGA CGACCAATGG CTGGATGCGA TCGAAAGCCA GATGGCGGAG 
CTAGGCACGG CCATTGCTGC TGCGCGCGCC GAAGCCATGC GCCTGATTGC GGCGATGATC 
GAACGGCTGC CTGTCGAAGG ACCGTTTCCA AAGGCCGATT GCTTTCTGGA AGGGACATTG 
GAGCAGAGAA TCAATGTCGA GGCGGCGCTT GATCTCGAAG AAGACTTTCG CCGTACCCTG 
CGCGATGGCC GCGCGAGAGA CCGGGCGGCA GGCCGCACGC TTGAAGGCCC GCATCGTACC 
GATCTGATCG TCCAGCACAG ACCCAAATCC ATGCCAGCCG CGCTCTGTTC CACGGGCGAA 
CAAAAGGCGC TTTTGATCGG TCTCGTGCTT GCCCATGCCC GACTGACGGC AGAGCTTTCC 
GGTATGGCTC CGATTCTCCT GCTCGATGAA ATCGCCGCGC ATCTCGATAC AGGTCGCCGC 
GCCGCGCTCT TTGGCATCCT TGATGAGCTT GGCGGACAGG CCTTCATGAC GGGCACGGAT 
CGCGCGCTTT TTGAAGCGCT TGAAGGGGAA GCGCAATTCT TCAATGTCTC TGCCGGTCAT 
CTCACCAGGC TGTCTGACAC CTGA 

 

Protein sequence

MNTPEPNQSR PERVSIRRLK LVNFRNYAEL SLPLGPGHVV LTGENGSGKT NLIEAISFLS 
PGRGLRRAAY DDVARANSLD GFAIHAALDC MIYGEAEIGT GTAGGGEGGR KVRINGIAGS 
GDDMLDYARI LWVVPSMDGL FTGGASDRRR FLDRMVLAID TAHGKRVLDY EKAMRSRNRL 
LNDGSNDDQW LDAIESQMAE LGTAIAAARA EAMRLIAAMI ERLPVEGPFP KADCFLEGTL 
EQRINVEAAL DLEEDFRRTL RDGRARDRAA GRTLEGPHRT DLIVQHRPKS MPAALCSTGE 
QKALLIGLVL AHARLTAELS GMAPILLLDE IAAHLDTGRR AALFGILDEL GGQAFMTGTD 
RALFEALEGE AQFFNVSAGH LTRLSDT