Gene OSTLU_89248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_89248 
Symbol 
ID5005844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009369 
Strand
Start bp86231 
End bp87589 
Gene Length1359 bp 
Protein Length452 aa 
Translation table 
GC content64% 
IMG OID640421265 
Productpredicted protein 
Protein accessionXP_001421566 
Protein GI145354595 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.113989 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCGCG CGCTCGCGTT CGGCGTCGCC GTCGGCGGAC GACCCGCGTC GCGCGCGATC 
CGGACGCGAC GCGCGACGCG CGGACGCGCG CCGAGAGCGC GAGAAACGCG CGCGAAGGTT
GACCAAACGC TCAATGAACG CGTCGCCAAC TTGCAGCCGT CGAAGACGGT CGCGCTGACC
GATCTCGCGC GCGCGATGCG CGACGCGGGC GAGGACGTCA TCGGTCTCGC CGCGGGCGAG
CCGGATTTCG CGACGCCGCG CGCGGTCGGC GACGCGGGGA AGGCGGCCAT CGACGCGGGG
AAGACGAAGT ACTCGCCGAA CGACGGCGAC GCGAAACTGC GAAACGCGAT CGCGCGAAAG
CTCGAGGAAG AGAACGGATT GACGTACGAT GGGAAAACGG AGATCGTGCT GTCGAACGGG
GCGAAACAGA GCGTGGCGCA GTGCGTGATG GCGACGTGCG GACCGGGGGA CGAGGTTCTG
GTGCCGGCGC CGTATTGGGT GAGTTATCCG GAGATGGTGC GGTTGTCGGG GGCGGAGAGC
GTGATCGTGC GGACGACGGC GGATGAGGGA TTTTTGGTGA CGCCGGAACA GCTTCGAAAG
GCGATCACGC CGCGGTCGAG GTTGTTGATT TTGTGCTCTC CGAGTAACCC GAGCGGGGCG
GTGTATCCGA AGGAGACGCT GGAGGAGTTG GCGAAAATCG TCGTCGAACA TCCGAGATTG
ATGGTGCTGA GCGATGAGAT TTATGAACAC ATCGTGTACG CGCCCGCGGA GCATCACTCG
ATCGCGGCGA TGGATGGGAT GTGGGAGCGC ACGATGGTGG TGAACGGGTT TTCCAAATCC
TTCGCCATGA CGGGATGGCG TTTAGGATAC GTCGCCGCGC CCAAACACTT CGCGCGGGCG
ATGAGTATGA TTCAATCTCA AATCACGAGC GGGCCTAACT CAATCTCTCA AGAGGCTGCG
CTCGCGGCGT TGGAATTAGG CTACAAGGGC GGCGAAGACG TCGCGGCGAT GGTGCGAGCG
TTCGAGCAAC GTCGCGACTT CGTCTCCGCA CGCTTAAACG CCATTCAAGG CGTCAAGCTC
CCGAAAGTCG ACGGAGCATT CTACGTATTC CCAGACGTCA GCGCCTTCTT CGGTGGGAAC
GCGTCGGCGG AAGGCTTCGG CCCCGTCGCG GACGTCGACG AGCTCTGCCG GTACATTTTA
GAAAAGGGCC AAGTCGCCCT CGTCCCCGGC AGCGCCTTCG GCGTCCCAGA GTGCCTGCGC
ATCTCCTACG CCGCATCAAA CGCGACGCTC GAGGAAGCGC TCTCGCGCAT AGAGCGATGC
CTATCGCTCG ACGTCTTCAC GCGAAACTCC CGGCGTTGA
 
Protein sequence
MSRALAFGVA VGGRPASRAI RTRRATRGRA PRARETRAKV DQTLNERVAN LQPSKTVALT 
DLARAMRDAG EDVIGLAAGE PDFATPRAVG DAGKAAIDAG KTKYSPNDGD AKLRNAIARK
LEEENGLTYD GKTEIVLSNG AKQSVAQCVM ATCGPGDEVL VPAPYWVSYP EMVRLSGAES
VIVRTTADEG FLVTPEQLRK AITPRSRLLI LCSPSNPSGA VYPKETLEEL AKIVVEHPRL
MVLSDEIYEH IVYAPAEHHS IAAMDGMWER TMVVNGFSKS FAMTGWRLGY VAAPKHFARA
MSMIQSQITS GPNSISQEAA LAALELGYKG GEDVAAMVRA FEQRRDFVSA RLNAIQGVKL
PKVDGAFYVF PDVSAFFGGN ASAEGFGPVA DVDELCRYIL EKGQVALVPG SAFGVPECLR
ISYAASNATL EEALSRIERC LSLDVFTRNS RR