Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_88029 |
Symbol | |
ID | 5003444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009362 |
Strand | - |
Start bp | 424343 |
End bp | 426568 |
Gene Length | 2226 bp |
Protein Length | 741 aa |
Translation table | |
GC content | 60% |
IMG OID | 640418865 |
Product | predicted protein |
Protein accession | XP_001419378 |
Protein GI | 145349927 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1850] Ribulose 1,5-bisphosphate carboxylase, large subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0692998 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCACGCG ACGCCCCGGC GACGCCTTCG TTAACGCGCG ACGGCGCGTC GTCGTGCTTT CACGTCACGT ACGACGTCGA CGCGACGTCG AACGCGGAGG CGCGACAGAT CGTCGACGCG CTGTGTCTCG AGCAAACCGT CGAGTTACCC GAAGCGCTCG TCCCGCCGGG GACGTGGATC AACGAGCACG TCGTGGGAAA ATGCGTGTCG ATCGAGCGGT GCGCTTCGGG GGTGGACGCG CGCGGGAAAG GCGCGAGTGG GGACGTGTAC AGGGCCAAGG TGCGGTACGC CGACGACTGC GCGGGCGGCG AGTTGCCGCA GCTGGTGAAC GTCATCTTCG GGAACACGAG CATAAAGGAA CGGGTGATGG TGCGAGACGT GGAACTTTCG GATGCGATGC TAGGGAAGTT CGCGGGAGCG AGGTTCGGGG CGAAGGGGCT GAGGAAATTG CTCGGGGTCG AACGCGGACC CATTGTGATG ACGGCGCTCA AGCCGATGGG GACGCCGAGC GAGAAACTTG CGGAAATGGC GTACGCGTTC GCGAAGGGGG GAATTGACAT CATAAAGGAT GATCATGGAT TGGCGAATCA ACGGTACGCC CCGTATGAGG AGCGCGTGCG GGCGTGTGCG GCGGCGGTGA AACGGGCGAA CGCGGAGACG GGACGGCGGT GCATCTACGC GCCGTGCATC AACGCTCCGG CGCACTTGGT CGTACAGCGC GCCAAGTTCG CCAAGGCCGC GGGTGCTGGG GCGGTGTTGA TGATTCCAGG AATCACGGGT TTGGATAGCA TGCGAGCGCT GGCAGAAGAT CCCGATTTTG GGCTTCCCAT CATCGCGCAC CCCGCTATTC TCGGCGCCAT GCTCGGCGGC GGAAGCCAAA ACACCATTCG CGGATTTGCT CATGGCGTCC TGCTCGGGTT GCTACCGCGA TTGGCTGGTG CAGATGCGAC TATTTTCCCA AACTTTGGCG GGCGGTTTGG CTTCAGTGTT GAAGAGTGCA AAGACATTGT TCACGGTGCC AGGCGAGTCT TGGCGCACCA CCCGTCAATC TTACCGAGTC CGGGCGGCGG CATGACGCTC GACAAGGTTA AAGTGATGAT GGAGACGTAC GGTCAAGATG TTTTACTCCT CGTCGGTGGA TCACTATACA GCCATAGCTC GGACTTGACG GCGAATGCGA GGCACATCCT GACTATGGCG GGTCGCACCG ACATCTACGG GCCTCGAGAA TCACAACCTG GCAGCTATCA CGTGCCAACG CACTACAGCA ACGGACTTTT CACCCCGGGA AGCGGCATGC GACCCAGATT GAAACTCGTA GACGAGAGTT CGAGTGCACA TAGCCCATAC CCTCTGACTC CGCACGGCAC GTATCCGGCT GCGCCGCCGT CGACGCCGTG GACGGTGGGC CTTGACCCTG AAGCCGTTGC TCAAATGAGC GCGCTTAAAG AGAAGAATTA TGCGCTCGAG TCTAAGGTTG ACGAGCTGAC GACGCTCGTG AAGAGCCTGA TGGACGCCGA GGCGAAGAGA AATGGAACTA AACACGCGTC TGAGGGGCCG CTAGACGGAA ATCATAGCAA GGTACTCAAT AGAAAGAAGG GAGAGTTTCA GTGGGAGCGC GTACCGCAGG AAATGTACAA GATGGATGGG GCGAGTTTCA AGGAGTGTTC ACGCATCGAA CTCATCGGAA AGCGAGGAGA GAGTCCAGTT TTCCACGTGC GTTACTTTGA AGTTGCCCCG GGTGGATGGA CGACGCTCGA GCACCACCAA CACGAACACG TCGTCGTAGT GCTTCGAGGG GAAGGCGAAA TCCAGCTCGG TCTGGAGTCT TACCATCTTG GGGTGGGTGA CGTCGGGTAT ACCGCACCGG GTGATACGCA CCAGCTTCGG TGCAAGGCAG GCACGACGGA GCCTTTTGGT TTCATATGCG TGGTTGCGGC GGACCGCGAT CGACCGATTG AAGATGAACC GTACGAGCTC CTGAAGATGT GCAAAATGGC TCATGTTTTG GATGAAAACG TCCGTGTGGC ACTCGAGACG CAGATCAAGC ACCGTGCCGA GCATAAGGCG GCGCATGGAG CCGTCGCACA GGGATCCGCG TGCGAGTGGA AGCCCGGTGG AAAGAAGAAG GCGCACGCGG CAGAGCCGAG CGCATGCGAG TGGACGCCGA AGAGCAAACA AGCGCCGGCC AAACCCAAAC CCACGCCGAC GCGATACTTC CCATAG
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Protein sequence | MPRDAPATPS LTRDGASSCF HVTYDVDATS NAEARQIVDA LCLEQTVELP EALVPPGTWI NEHVVGKCVS IERCASGVDA RGKGASGDVY RAKVRYADDC AGGELPQLVN VIFGNTSIKE RVMVRDVELS DAMLGKFAGA RFGAKGLRKL LGVERGPIVM TALKPMGTPS EKLAEMAYAF AKGGIDIIKD DHGLANQRYA PYEERVRACA AAVKRANAET GRRCIYAPCI NAPAHLVVQR AKFAKAAGAG AVLMIPGITG LDSMRALAED PDFGLPIIAH PAILGAMLGG GSQNTIRGFA HGVLLGLLPR LAGADATIFP NFGGRFGFSV EECKDIVHGA RRVLAHHPSI LPSPGGGMTL DKVKVMMETY GQDVLLLVGG SLYSHSSDLT ANARHILTMA GRTDIYGPRE SQPGSYHVPT HYSNGLFTPG SGMRPRLKLV DESSSAHSPY PLTPHGTYPA APPSTPWTVG LDPEAVAQMS ALKEKNYALE SKVDELTTLV KSLMDAEAKR NGTKHASEGP LDGNHSKVLN RKKGEFQWER VPQEMYKMDG ASFKECSRIE LIGKRGESPV FHVRYFEVAP GGWTTLEHHQ HEHVVVVLRG EGEIQLGLES YHLGVGDVGY TAPGDTHQLR CKAGTTEPFG FICVVAADRD RPIEDEPYEL LKMCKMAHVL DENVRVALET QIKHRAEHKA AHGAVAQGSA CEWKPGGKKK AHAAEPSACE WTPKSKQAPA KPKPTPTRYF P
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