Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_87707 |
Symbol | HDA3505 |
ID | 5002651 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009361 |
Strand | + |
Start bp | 176280 |
End bp | 177722 |
Gene Length | 1443 bp |
Protein Length | 480 aa |
Translation table | |
GC content | 62% |
IMG OID | 640418072 |
Product | predicted protein |
Protein accession | XP_001418630 |
Protein GI | 145348386 |
COG category | [B] Chromatin structure and dynamics [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.18467 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGGCGC GCGCCGTCGC TCTCGACCAC GCGCGCGTCA ACGTCGACGA TGTCGACGCG CTCGTGTCGG GCCTCGGCGC GCTCGGCCTG CGAGCGAGCG AGGACAAACA GCATCCGATC ACGCGCGTGC AAACACCGCC GCCGTTGCGG AAGCACGCGC ACGCGCGCAC GGTGAGCGTC TCGGATGTGG ATGTGTCCGC GGTGAAGCTC GAGCGCGACG AAGCGCCGGC GAAGCGCAAG CGCCGCGTGG GGTTGTTGTA CGACGACGCG ATGGAAATGC ACGAAAAGGA GGGACACTTC GAACAGCCGG CGAGACATCG GGTCGTCGTG AATGAGATCA AGGCGGAGAA ACTGGATTTG AGATGCGAAC GGCTGGAGGC GCGAGAGGCG ACGGAGGCGG AGCTGACGCG CGCGCACACG AAGGAACACG TGGCGTTCGT CGATTCGGCG TTCGACGTCG ATGGAGAGAA GGTACAAGTT ATGACTGGCG AGGACGTGTT CGGCGATGAC ATCTTCTTCA CGAAGCATAC GGCGAAGGGG GCGCGCATGG CGGCGGGGAC GGTCGCGGAG GCGTGTTTGG CGGTGGGGCG AGGAGACGTA GACCGAGCGT TCGCGGTGGT GCGACCACCG GGACATCACG CGGTGTGCGG ACAAGCGATG GGATTTTGTT TCTTCAATAA CGCCGTCGTG GGAGCACGAG CGGTGATCGA GACAAAACTG TGCGAGCGAG TCCTGATAAT CGATTGGGAC GTGCACCACG GTAACGGCAT CCAGGACATC GTGTACGAAG ACGAGAGCGT GATGTACGTA TCGTTGCATC GATACGGCGA TGGATTTTAC CCGGGCACGG GTGCTGTAGC GGAGGTTGGT AAAGGCGGTA CGAATGTGAA CGTTGCGTGG TCGGAGAAGG GCTTGGGAGA CGCCGATTAC TTGGCCGCGT TTGACGTCGT CATCGAGCCC GTGGTGAAAT CTTTCGCTCC AGATTTGATC ATCATCGCCG CTGGATTCGA CGCCGCGGAC GGCGATCCAC TCGGAGGTAT GATGGTATCG CCCACGGGCT ACATGCACAT GACGAAGCGT TTGATTGAAA TCGGTACCGG GCGCGTCGTC GTCGCTCTTG AAGGTGGTTA CGCCCTTCGC CCGCTCGCCA CGTGCGCGAC GGCGACGCTT CGAGCGTTAC TCGGCGATGA ACCGAAGCCT ATATCATCGC GGTCTCGACC GAGGAAATCA AGCATCAAGC TCTGTCGCGA GCTCGCGTCG CTGCTCGCAG AGCACTGGCC CGTGCTAGAG AGCGACGAGT ACAAGAATTC GACGGCGTTG ATCGCGAAAC GCGCCACCGT CGTCGGCGCC GCGCGAGAGT ACCCCACCGG TCGCCGCTCG AAATCGCCCG CAAATTCTTC CTCGTCCGCC TCCACTGCCG TGGGCGCCGT CTGTACGACT TAA
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Protein sequence | VKARAVALDH ARVNVDDVDA LVSGLGALGL RASEDKQHPI TRVQTPPPLR KHAHARTVSV SDVDVSAVKL ERDEAPAKRK RRVGLLYDDA MEMHEKEGHF EQPARHRVVV NEIKAEKLDL RCERLEAREA TEAELTRAHT KEHVAFVDSA FDVDGEKVQV MTGEDVFGDD IFFTKHTAKG ARMAAGTVAE ACLAVGRGDV DRAFAVVRPP GHHAVCGQAM GFCFFNNAVV GARAVIETKL CERVLIIDWD VHHGNGIQDI VYEDESVMYV SLHRYGDGFY PGTGAVAEVG KGGTNVNVAW SEKGLGDADY LAAFDVVIEP VVKSFAPDLI IIAAGFDAAD GDPLGGMMVS PTGYMHMTKR LIEIGTGRVV VALEGGYALR PLATCATATL RALLGDEPKP ISSRSRPRKS SIKLCRELAS LLAEHWPVLE SDEYKNSTAL IAKRATVVGA AREYPTGRRS KSPANSSSSA STAVGAVCTT
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