Gene OSTLU_87414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_87414 
Symbol 
ID5002288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009360 
Strand
Start bp5409 
End bp6416 
Gene Length1008 bp 
Protein Length335 aa 
Translation table 
GC content59% 
IMG OID640417709 
Productpredicted protein 
Protein accessionXP_001418129 
Protein GI145347345 
COG category[C] Energy production and conversion 
COG ID[COG0039] Malate/lactate dehydrogenases 
TIGRFAM ID[TIGR01758] malate dehydrogenase, NAD-dependent
[TIGR01759] malate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones67 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCGT CCACGGTCGA TGACGTCGTC ACCGTTCTCA TCACCGGCGC GGCGGGGCAA 
ATCGGGTACG CGCTCGCCCC GATGGTGTGC GCGGGCGCGG CGACGGGGCC TGGGAAGAAG
ATTGCGTTGA AACTGTTGGA CGTCGAGTTC GCGAGCGAAG CGCTGCGAGG GGTGAAGATG
GAGATCATGG ATTGCGCCTT CGACGCGTGC GTCTCGGTGG ACGTGTTCAC GGATTGCGAA
AAGGCGTGCG AAGGCGTTGA CGTGGCGATC ATGGTTGGCG GGTTTCCGCG CAAGCAAGGC
ATGGAACGCA AGGACGTGCT GGGGAAAAAT GTGGCGATTT ACAAACAGCA AGCGAGCGCG
TTGGCGAGCA AGGCGAAGAA AGATGTGAAG ATTGTCGTTG TCGCCAATCC CGCGAACACG
AACGCGAAAA TTTTGGCGAA ATTCGCGCCG TCGATTCCCA GAGGCAACGT CACGTGCATG
ACGCGGCTCG ATCACAACAG AGCGCTCGCG CAGTTGGGTG AAAGAAGCGG TAAAGCGACG
ATAGAGGTGA AGAATGCGAT CATTTGGGGG AACCATTCGT CGACGCAGTA CCCGGACGTG
AATCACGCCA CGATCGAGGG TAAGCCCGCG CGGGAGGTGA TTGGAAATGA CGCCTACCTC
GACGGCGATT TCGTAGACGT CGTGCGCGCG CGAGGCGCGG CAATCATCGA GGCGAGAAAG
TTGTCATCAG CGCTCAGCGC GGCGAGCTCG GTGTGTGACC ACGTGTACGA TTGGATTCAC
GGCACAAAAG AAGGTGAATG GACTTCAATG GGAGTCATCT CTGACGGGTC GTACGGCGTC
CCAGAGGGGC TGGTGTACTC TTTCCCGGTG ACGTGCACGG GTGGCAAATG GCAAATTGTG
CAAGGGTTGA GCATCGACGA GCGCTCGCGG AAACTCATGG ACGAGTCCGC GAAGGAGCTT
ACGGAGGAGT TTGAGTTGGC GGAGCAATGT TTGGCAGAAT CTGCGTAG
 
Protein sequence
MPASTVDDVV TVLITGAAGQ IGYALAPMVC AGAATGPGKK IALKLLDVEF ASEALRGVKM 
EIMDCAFDAC VSVDVFTDCE KACEGVDVAI MVGGFPRKQG MERKDVLGKN VAIYKQQASA
LASKAKKDVK IVVVANPANT NAKILAKFAP SIPRGNVTCM TRLDHNRALA QLGERSGKAT
IEVKNAIIWG NHSSTQYPDV NHATIEGKPA REVIGNDAYL DGDFVDVVRA RGAAIIEARK
LSSALSAASS VCDHVYDWIH GTKEGEWTSM GVISDGSYGV PEGLVYSFPV TCTGGKWQIV
QGLSIDERSR KLMDESAKEL TEEFELAEQC LAESA