| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_87099 |
|---|
| Symbol | |
|---|
| ID | 5001563 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009358 |
|---|
| Strand | + |
|---|
| Start bp | 748742 |
|---|
| End bp | 751234 |
|---|
| Gene Length | 2493 bp |
|---|
| Protein Length | 830 aa |
|---|
| Translation table | |
|---|
| GC content | 58% |
|---|
| IMG OID | 640416984 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001417342 |
|---|
| Protein GI | 145345705 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG5207] Isopeptidase T |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.000037034 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCGC GCGTCGACGA CGATGCGCTC GCGGTGTGCG TCAGAGCCGC CGAGCGCGGG
CGCATCGCGC GCGTGCGCGA CGACCAAACC GTGTTCAAAG ATGAGTGCGC GTTCTCGTTC
GACTCTCCGT TGAGCGCGCA CGGCGTGTAC GTCAACGCGG AGACGCTGTT CGGGTACTCG
CGAAAGTATG TGGCGCTAGA CGCCGCGCGC ACGGGGTGCG AGGTGTACGT TCGGGTGAAG
ACGACGCGGA CGTTGAAACC GACGAGCGAG GGCGAAGCGA AGGACGAGAC GCCGACGACG
CTCGGATTCG GTGTCGACGG TGGATTCGCG AGTGAGAGCG ATAAATACGA CGTGGATACG
ACGTATGCGT TAGTGATCGC TCCCGATTTC GACGATGTCT CGCGCGCGCT GCCTTTGGAA
GGATTACCGG AGACGCTTCG CGAAGCGTGC GAGAAAATCG CGCAAAAGCA AGGCTTCCAC
GACACCGAGG AGACGAAATC TTGGCAAGAG ATTCGCGAGG TGTCCAGGTA CGCGCTGGAG
CTCGCGCAGG AGGACAACGG AAAGAAGATT CCGAGCGATC CCTCGAAGTG GCGTTGCGAG
GAGACCGGAG AGAGTGGAAA CTTGTGGGTC AACTTGAGCG ACGGTCACAT CGGGAGCGGG
CGCAGACATT TTGATGGGTC GGGTGGTAAC GGGAGCGCGC TGCGGCACTA CGAAGCGATG
AAGGCGCAAG GAAAGCACTA TCCGCTGGTG GTGAAGCTCG GTACGATCAG TGCGAACGGC
GCGGATGTGT ATTCGTACTC CCCAGACGAA GACGACATGG TGGAGGATCC GTACTTGGCC
GTGCACCTGC GACACTGGGG AATCAACATG CTGTCAATGG AGAAGACGGA AAAGAGCATG
GCTGAGTTGC AAATTGAGCT CAATAAAGGT TTTGAGTTTG ACAAAATCAC CGAGGCCGGG
TCGCAGTTGG AGTCGGCGTA CGGGCCGCGA CTCGTCGGCT TGAAAAACAT GGGCAACACG
TGCTACTTGA ACTCGGTCAT GCAGGTGCTT AAGCAAGTGC CTGCGGTGTG CGATCGGTAC
TTTGACAAAT ATGAAATCTT TCAGAGCGCG CCGGAAGATC CCGTGACTGA TTTCCCGACG
CAAATGTCAA AACTCGTGAA TGCTCTCGTC TCTGATGAGT ACGCGAGTCC AGAGGCTGAG
AACGCGGCGG TGGCGGTGTG CCCGCGCATG TTTAAACAGC TCGTCGGCAA AGGACATCCA
GAGTTTAGTA CTGGTCGTCA ACAAGACGCG GTAGAGTATT TCCAGCACTT GTTAGACGTG
ATGACTCGCG CTGAACGAGC TGCGAGCTCG CGAGTATCAG CTGGTCCACC GACTGCGGCG
CAGTTTACGT TTGAGATCGA GGACAAGCTC ACGTGCGTGG AAAGTGGGAA CGTGCGCTAC
TCGACGCGAA AGGACAACAT CCTGTCGCTC GGTATTCCTT TAGACAAGGC AACGAACAAG
GCATCGGTTG CCGCTTTCAA AGAACGCGAG CTCAAGCGCC AGAAAAAGGA GGAGGAGGAC
GTGGAAGAAA TCGTGCGACC CGAGGTGCCG TTTTCTGCGT GCCTTGAAGT CTTCGGCTCG
ACTGAGACCG TTGAAGACTT CTACAGCACT GCGCTCAAAC GCAAATCGAT CGCGTCAAAA
GTGGCGCGCA TGAAGACGAT GCCCAACTTT CTCGCGGTGC AGCTCAGGCG TTATTACGTT
GGTGACGATT GGACGCCGAA AAAGCTCGAC GTCCTCGTCG ACGTCCCGAA GACGATTTCG
CTCGAGCATC TTCGCGCGCG GGGGCTACAG CCTGGGGAAG TCGAACTTCC CGAAGACCAA
GATGGTGCCG CCATGGAAAC CTCATCCACG CCAGCGCCAG CGCGCGTTGA ACCCGACATG
GCGATCGTAA GCGCGCTCAT GTCGATGGGT TTTAGCGAAA ACGGAAGCAA GCGCGCCGCG
CTCGCGACGA ACAACGCGTC TACTGAGGTG TCGATGGAAT GGGTGTTCGC GCACATGGAA
GACGCGGACT TCAACGAGCC GCTTCCCGAT CCATCTGAGT TACCATCTGT GAGTGCTCCA
TCCGCGGTGA ATCCAGAATC GGTCATGATG CTCACGTCCA TGGGCTTCGG CGAAGACGCC
GCGGAGGCCG CGCTCAAGGC GTGCGCGGGG AATCTGGAGC GCGCGGCGGA CTGGTTGTTT
TCGCACGCAG ATGATCTCCA ATCGGCGATC GCTCAAGTGA ACGGTGCCAC AAACGATGTG
GGTACGGACG TCGACAGCAC CACGCTGGAC GGCGCCGGCG AATACGAGCT CTTTGGTATC
ATCAGCCACA TGGGCGGGAA CACGAACTGC GGGCATTACG TCGCCCACGT GGAAATCGAC
GGCAAGTGGT ACATCTTTAA CGATCGCAAG GTGGCGCTTT CGAGACAGCC GCCTACCGAC
CTCGGTTACT TGTACGTTTT TAGAAGACGA TGA
|
|---|
| Protein sequence | MSARVDDDAL AVCVRAAERG RIARVRDDQT VFKDECAFSF DSPLSAHGVY VNAETLFGYS
RKYVALDAAR TGCEVYVRVK TTRTLKPTSE GEAKDETPTT LGFGVDGGFA SESDKYDVDT
TYALVIAPDF DDVSRALPLE GLPETLREAC EKIAQKQGFH DTEETKSWQE IREVSRYALE
LAQEDNGKKI PSDPSKWRCE ETGESGNLWV NLSDGHIGSG RRHFDGSGGN GSALRHYEAM
KAQGKHYPLV VKLGTISANG ADVYSYSPDE DDMVEDPYLA VHLRHWGINM LSMEKTEKSM
AELQIELNKG FEFDKITEAG SQLESAYGPR LVGLKNMGNT CYLNSVMQVL KQVPAVCDRY
FDKYEIFQSA PEDPVTDFPT QMSKLVNALV SDEYASPEAE NAAVAVCPRM FKQLVGKGHP
EFSTGRQQDA VEYFQHLLDV MTRAERAASS RVSAGPPTAA QFTFEIEDKL TCVESGNVRY
STRKDNILSL GIPLDKATNK ASVAAFKERE LKRQKKEEED VEEIVRPEVP FSACLEVFGS
TETVEDFYST ALKRKSIASK VARMKTMPNF LAVQLRRYYV GDDWTPKKLD VLVDVPKTIS
LEHLRARGLQ PGEVELPEDQ DGAAMETSST PAPARVEPDM AIVSALMSMG FSENGSKRAA
LATNNASTEV SMEWVFAHME DADFNEPLPD PSELPSVSAP SAVNPESVMM LTSMGFGEDA
AEAALKACAG NLERAADWLF SHADDLQSAI AQVNGATNDV GTDVDSTTLD GAGEYELFGI
ISHMGGNTNC GHYVAHVEID GKWYIFNDRK VALSRQPPTD LGYLYVFRRR
|
|---|
| |