Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_7961 |
Symbol | |
ID | 5006587 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009374 |
Strand | - |
Start bp | 229255 |
End bp | 229791 |
Gene Length | 537 bp |
Protein Length | 179 aa |
Translation table | |
GC content | 56% |
IMG OID | 640422008 |
Product | predicted protein |
Protein accession | XP_001422689 |
Protein GI | 145356957 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5249] Golgi protein involved in Golgi-to-ER retrieval |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.2978 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TCGCCGTTGG CGCGCGCGCA GGCGAAACTC GCGCAGCGTC TTCAAATCTT TCTCGATAAA TCTGTCCCGA AGCGCGCCGA ACGGTGGAGC GCGTACGCGT GCGTCGCGCT GGTGTACGCG ATTCGCGCGT ACTTTCTGCG GGGGTACTAC ATCGTGACGT ACGGGCTGGG GATCTATAAC CTGAACCTGT TGATTGGATT TCTGAGCCCG CGAAACGATC CCGAATCGCT GCGCGCGTCG AACGACGGCG ACGATGGACC GTCGCTGCCG ACGAGCAACG AACAAGAATT CAAACCGTTC GTGCGGCGAT TGCCGGAGTT TAAGTTTTGG TGGATGAGCT TGAAGTCGAT CGGGACGGCG TTCGCGATGA CGTTTATGCC GATGTTCGAC ATACCGGTGT TTTGGCCGAT TTTGTTAATG TACTTCATCA TGTTGTTTTT CATGACGATG AAACAGCAGG TGAAGCACAT GATTAAGCAT AAATACGTGC CGTTCACGAC GGGGAAGCCG AAGTTTGCGG GCGCGAGCGC GGGCGGG
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Protein sequence | SPLARAQAKL AQRLQIFLDK SVPKRAERWS AYACVALVYA IRAYFLRGYY IVTYGLGIYN LNLLIGFLSP RNDPESLRAS NDGDDGPSLP TSNEQEFKPF VRRLPEFKFW WMSLKSIGTA FAMTFMPMFD IPVFWPILLM YFIMLFFMTM KQQVKHMIKH KYVPFTTGKP KFAGASAGG
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