Gene OSTLU_7923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_7923 
Symbol 
ID5004993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009367 
Strand
Start bp387133 
End bp387681 
Gene Length549 bp 
Protein Length183 aa 
Translation table 
GC content57% 
IMG OID640420414 
Productpredicted protein 
Protein accessionXP_001420989 
Protein GI145353373 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones72 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00469197 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GAAAAGGCGG TGCCGTACAC CGTCTTCGTC AAGGATGTGC CGGCGAGCGT GAGCGAACGC 
GAATTAGCGG ATGTTTTCGC CTCGTGCGGC CGCATCATAG ACTGTCGCAT GTGCGGTGAT
GCGAACACAC ACAAGTTTAG CTACGCCTTT GTGGCGTTTG AGTGCGCCGA GGCGGTGGAT
CGGGCGTTAT TGTTGGACAA GACGCCGCTC CACGGGAAAA ACATCATGGT GAAGAAGAGC
GACACCGCGG TGATCCCAGT GAACCCGTTA CTGCTACCGC AGAATGAACG AGAGGTTGAA
TCGTGCGCGA GGACAATTTA CGTCGCAAAC GTCGACAAGA CCGTGGACTC GCACGCGTTG
AAGTTACTTT TCGAGGACCG CGCCGGCCCC GTCAACCGCT TGCATTTGCA AGTGAAGAAC
AACGCCGTGG CGAATGTAGC CTTCGTAGAG TTCGTCGACC TCGAAAGCGT GGGAACCGCG
CTGCATTTGA CGGGTGAACA GCTTGGAAAC CGCATGATTC GCGTGAGTGC GTCAAAGACG
CCGCTCCGT
 
Protein sequence
EKAVPYTVFV KDVPASVSER ELADVFASCG RIIDCRMCGD ANTHKFSYAF VAFECAEAVD 
RALLLDKTPL HGKNIMVKKS DTAVIPVNPL LLPQNEREVE SCARTIYVAN VDKTVDSHAL
KLLFEDRAGP VNRLHLQVKN NAVANVAFVE FVDLESVGTA LHLTGEQLGN RMIRVSASKT
PLR