| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_7116 |
|---|
| Symbol | |
|---|
| ID | 5004009 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009364 |
|---|
| Strand | + |
|---|
| Start bp | 323814 |
|---|
| End bp | 324467 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | |
|---|
| GC content | 69% |
|---|
| IMG OID | 640419430 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001419970 |
|---|
| Protein GI | 145351195 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.150512 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0561113 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | CGCGTCCTCG TCGTCGGCGC CACGGGCCAG ACCGGCGCGC TCGTCGTCCG CGAGCTGTCG
CGCGCGGGCA GGGCGCGCGC GATCGTCGCC GGCGCGCGAT CGGCGGCGAA GGCGACGAAG
CTCGGCTTGG ACGCGCTGCC GGGGGTGGAG ATTCTCGACG GCGTCGACGT CACGCGCGGC
GTCGACGCGC TGGCGCTCGC GTTCGAGGGC TTCGACGTCG TCGTCGTCGC CACGGGATTC
GTGCCGGGAA ATCCGCTGAA GATGAACGCG GCGGCGCGCG CGGTGGATAA CGAGGGCGTG
TGCGCGGTGG CGGACGCGGC GAAGCGAGCG AACGTCAAGC GCGTCGTGCT GATATCGTCC
ATCCTGACGA ACGGACCGGG ATTCGGGGCG CAGGATACCG CTGGATACAA GATCACGAAC
GCGTTCGGAA GGGTGCTCGA AGAAAAGCTC GTGGGGGAGA ATCACCTGCG CGCGAGCGGC
GTGCCGTGGA CCATCGTTCG ACCGGCTGGG TTGAAGACGG ACGCGCCGAA AAATCCGCTC
GTCGTCACCG GGGAAGACGT GATGACGAGC GGTGAGATCA GCCGCGAGCT CGTCGCGCGC
GTGATGGTGG AGGCGGCGTT CGACGCGCGC GCGGAGGGTA AAGTTTACGA AATC
|
|---|
| Protein sequence | RVLVVGATGQ TGALVVRELS RAGRARAIVA GARSAAKATK LGLDALPGVE ILDGVDVTRG
VDALALAFEG FDVVVVATGF VPGNPLKMNA AARAVDNEGV CAVADAAKRA NVKRVVLISS
ILTNGPGFGA QDTAGYKITN AFGRVLEEKL VGENHLRASG VPWTIVRPAG LKTDAPKNPL
VVTGEDVMTS GEISRELVAR VMVEAAFDAR AEGKVYEI
|
|---|
| |