Gene OSTLU_6338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_6338 
Symbol 
ID5000852 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009357 
Strand
Start bp411097 
End bp411795 
Gene Length699 bp 
Protein Length214 aa 
Translation table 
GC content51% 
IMG OID640416273 
Productpredicted protein 
Protein accessionXP_001416652 
Protein GI145344255 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0128162 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATCCTTGTCA CCGGGGCGAC CGGTCGCGTT GGTAAAGAAG TCGTCGCACG GTTATCGGCG 
ATACCCGGAT TCAGAGTACG CGCGGCGACG CGGGATAAAT CGGCATACGC CGAGGCGCTC
GGCGCGCACG AAACCGTGGT TTTTGACCTG GAAGATAAAT CGACTTGGCC AGGCGCGATA
CGAGGCGCGA CGAGATTGTT CTCGAGCACG CAGGACAAGC ACATCAGCCA GCACATGGAG
TTTGTGAAGT GGTTGGGAAA CACTCCAGAG GTACGAGATA GCTTAAAGCA CATTGTACGG
GTGAGTTGTT TCGGAGCTGA TACGAATACA AACTCGTACG ATGCGTCTAT TCACGTATCG
AGACAGAACG CCGGAATACC GCTCATGCTG CAGCATTATT GGTGGTCCGA GGAATGCTTT
ATCGAAGCCG GTTTCAAGGA AAAGTTGACT TCTGTTCGAG GTAACTTTTA CATGAATCAT
TTACTGAAGA ACGAGCTCGA AAGTATAAAG ACAAAGGGAA TGTTCACGTC GCCTTTGGGA
GACTGCAAGA ATAGTTTTGT AGCGTGCAAC GACATGGCGG AGGCAGCGGT GAGATGCTTC
GTCGAGGGAC CTGAAAGACA CGGGGATAAA TTCTATGACA TCTGCGGTGC GCAAAGTACG
AGTATGGCTG AAGTGGCTGA GATTTTAACG AAAGCTTTA
 
Protein sequence
ILVTGATGRV GKEVVARLSA IPGFRVRAAT RDKSAYAEAL GAHETVVFDL EDKSTWPGAI 
RGATRLFSST QDKHISQHME FVKWLGNTPE VRDSLKHIVR VSCFGADTNT NSYDASIHEC
FIEAGFKEKL TSVRGNFYMN HLLKNELESI KTKGMFTSPL GDCKNSFVAC NDMAEAAVRC
FVEGPERHGD KFYDICGAQS TSMAEVAEIL TKAL