Gene OSTLU_6116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_6116 
Symbol 
ID5002994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009361 
Strand
Start bp343745 
End bp344479 
Gene Length735 bp 
Protein Length245 aa 
Translation table 
GC content56% 
IMG OID640418415 
Productpredicted protein 
Protein accessionXP_001418677 
Protein GI145348483 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.0865644 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0244073 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GCCGTGTTCA AACCGGCGGA CGAAGAACCG TTCGCTCCGA ACAATCCGAG AGGACACCGA 
AGTAGCCATA ATGGCGAGGG TATGCGCAAA GGGACGAAGG CGGGCGAAGG TGCCACGCGT
GAAGTTGCGG CGTACTTGCT CGATCACGGT GGTTTCGCCG GCGTTCCCGC GACGTCTCTC
GTCAACTTGA CGGATGGGAC CGAAGAGGAT GATGGAAAGC TCGGCTCGCT TCAGGAATAC
GTCGAAAACA CCGCTGAGGC AGAGGAGTAT GGCCCAAGCA TGTTTCCTAC GGAAGAAGTG
CACAAGATTA CCGTTCTCGA TATTCGCTTG GCGAACACCG ACCGCAACGC TGGAAACATT
TTATGCCGTA GCGACGAGAA TGGCAACATC GTGGCGTTGA TTCCAATCGA CCACGGGTAC
GCACTTCCGC ACACACTCGA AGACGTCTGT TTCGAGTGGG AATTCTGGCC CCAAGCATCA
ATTCCATACA GCGACGACGT CAAGGAGTAC GTCGCTATGC TCGACGCCGA CGCCGACGTC
GAGTACTTGC GAGAAAACGA CATCGAGCTT CAAGCCTCCT CAGAACGCGT TCTTCGCGTG
TGTACTTTGG TTCTGAAAGA AGCTGTACGC CGCAACTTCA CCGCAGCGAA CATAGCCTCC
ATGCTCAGTC GAAAGATGTC CAACAGGAAG TCGGACATTG AAAAGATTGC CGCGCAAGCG
GCGTCGACGG CCATC
 
Protein sequence
AVFKPADEEP FAPNNPRGHR SSHNGEGMRK GTKAGEGATR EVAAYLLDHG GFAGVPATSL 
VNLTDGTEED DGKLGSLQEY VENTAEAEEY GPSMFPTEEV HKITVLDIRL ANTDRNAGNI
LCRSDENGNI VALIPIDHGY ALPHTLEDVC FEWEFWPQAS IPYSDDVKEY VAMLDADADV
EYLRENDIEL QASSERVLRV CTLVLKEAVR RNFTAANIAS MLSRKMSNRK SDIEKIAAQA
ASTAI