Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_582 |
Symbol | |
ID | 5005023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009367 |
Strand | + |
Start bp | 138823 |
End bp | 140436 |
Gene Length | 1614 bp |
Protein Length | 538 aa |
Translation table | |
GC content | 53% |
IMG OID | 640420444 |
Product | predicted protein |
Protein accession | XP_001420914 |
Protein GI | 145353210 |
COG category | [K] Transcription |
COG ID | [COG0557] Exoribonuclease R |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.000266967 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCCCTTGG ATCCAAAGTT GCCGAAGGGC CGCGTTTCTG AGTTTAGCGT GCCGAAGTCG TTACAGAAGA CGCTGGCGTC GGGGGCGGAG GATGTCGAGG ACGTCTTCGT GGCGGTGCGA CTTAGAAAGT GGAGCAAAGG GATGTCGATG CCGATGATGG ACATCATCGA GGTCGTGGGA AAAGGAAGTA TGGGTGATGA TTTAGATTTC ATGACGAAAG TCATCGTCGC CGAGCACGGC ATAGAGAGCG GAGATTTTAG CGCGGATGCG ACGGCGTGTT TACCAAAGGT CAAAGTCGGC GATCACTGGA AAATTCCACC CGAGGAGATG AAACGGCGGG TGAATTTTAG GGAAAAGCTC GTTTTTAGCA TAGACCCACC GACGGCGCGA GATTTGGACG ATGCGCTGAG CGTCCAAGTT TTGCCCGATG GTTGTCTAAA CGTCGGCGTG CACATCGCCG ACGTGTCACA CTTCGTCAAG CCTGACACGC CGCTCGACGC CGAGGCGAGA GAACGAGGCA CCACGACGTA TCTCGTGCAC ACCATTTTTC CAATGTTGCC TAGACTTTTG TGCGAAAATC TGTGCTCACT CAATCCTGGC GTTGAAAGAT TAACGTTTTC GGTGGAATGG AAGATGACGC GTGGTGGCGT TGTGAAGAAT GTCTCGTTCA AGCGTGGCGT GATAAAGAGC GCTGCGAAGC TGTCATACAT TCACGTTCAA AATGTGATCG ATGCTGGGTC GGACGTGAAC AAAGCGAAAG AGGCACTAGA TGATGTGAAG TTTTCAGGCG CGTACACCGC TGAAGACGTC ATCGAGAGCA TTTCAATCTT GAACGCAGCT GCGAAAGCGA TGCGCAAGAA GAGATTTGAA GCCGGCGCTG TTCGATTGGA TCAACCAAAG GTTGGTTTTG AGCTTAACGA TGACTACGAG CCCGTGGGAG CTGCACCTTA CGTCATTCGC GACAGCAATC GTCTTGTCGA GGAGTACATG CTACTCGCCA ATATGTACGT CGCCGAGTTC ATAGCCGAGA TTTTCCCATC GCACGCCATG CTTCGATGCC ATCCGCCGCC GAACGAACGG AAGCTCATGG AGCTATCCAC GTTCGCCAGC GAGCACGATA TCGATATCGA CATATCATCT TCGAAACGTC TTCACGACAG TTTGCGAGCA ATAGCGCGCG ACTCGCAAGA TTTGTTTGAC ATCGTGCAGC TGCTCGCTAC AAAGCCCATG CAACTGGCGA AATACTTTTG TACGGGGAGC GTGGACGAAG AGCAATGGCG GCATTACGCT CTCGCCGTTC CTTATTACAC GCACTTTACG TCGCCTATTC GTCGATATCC GGATATCATT GTGCATCGTC TACTCGCAGC GGCGCTCGAG CACGCTGAGA GACAAGGGAA ATCCAGTGAG CGAGACGTCG TAGAGAAACA CAGTCTCATG ACGCCGGAAA TCTGTAGCGA CGTCGCTGAT CACTGCAACG AGCGGAAACT CGCGGCGAAG TACGCCCAAG AGCGGAGTCA GCACTTGTTT CTCTGCAAAT ATCTGCAGAA AAATCCGGTC ATCGCGCGTG CGATTGTAAG GCAACTCGGG CAGCAATACG TCGTCGCCTA TCTC
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Protein sequence | VPLDPKLPKG RVSEFSVPKS LQKTLASGAE DVEDVFVAVR LRKWSKGMSM PMMDIIEVVG KGSMGDDLDF MTKVIVAEHG IESGDFSADA TACLPKVKVG DHWKIPPEEM KRRVNFREKL VFSIDPPTAR DLDDALSVQV LPDGCLNVGV HIADVSHFVK PDTPLDAEAR ERGTTTYLVH TIFPMLPRLL CENLCSLNPG VERLTFSVEW KMTRGGVVKN VSFKRGVIKS AAKLSYIHVQ NVIDAGSDVN KAKEALDDVK FSGAYTAEDV IESISILNAA AKAMRKKRFE AGAVRLDQPK VGFELNDDYE PVGAAPYVIR DSNRLVEEYM LLANMYVAEF IAEIFPSHAM LRCHPPPNER KLMELSTFAS EHDIDIDISS SKRLHDSLRA IARDSQDLFD IVQLLATKPM QLAKYFCTGS VDEEQWRHYA LAVPYYTHFT SPIRRYPDII VHRLLAAALE HAERQGKSSE RDVVEKHSLM TPEICSDVAD HCNERKLAAK YAQERSQHLF LCKYLQKNPV IARAIVRQLG QQYVVAYL
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