Gene OSTLU_5174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_5174 
Symbol 
ID5006460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009373 
Strand
Start bp134982 
End bp135707 
Gene Length726 bp 
Protein Length242 aa 
Translation table 
GC content55% 
IMG OID640421881 
Productpredicted protein 
Protein accessionXP_001422402 
Protein GI145356364 
COG category[S] Function unknown 
COG ID[COG4886] Leucine-rich repeat (LRR) protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones70 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GCGAAAGAGA CCAAACGCTT GGACCTGAGC GGGCTCGGCT TGCGAGAGAT TCCGGGCGAA 
GCGCGAGAAT TGAGCGATTT GATCGAATTG CAGGTGTCGA ATAATTTATT GTACGAAATA
CCGGGCGATT TGATCGCGAG GTTTGAGAAA TTGGAGCGAT TGGGATGCGC CGGGAATCGC
CTGCGAGCGC TGCCGCGCGA GGTCGGGGGG TTGAAGTCGT TGCGGGGAAT CTGGGCGCAC
GGGAATTTGT TGAATCGCGT GCCCGAAGAG ATTGGCAATT GTGAGAGTTT GCGAAATTTA
GTGCTCGGGG GCAATCGCCT GCGCGAGCTG CCGAAGACGT TGGGGAACTT GAAGAACTTG
GAAGAGCTTT CGGCGCCGGG AAATCAGCTG ACGTCGCTGC CGGATTTGGG ATCGATGCCG
CTGTTGCGAG AGATTGATTT ACACGGGAAC GCGATAGAGG CGTTACCGGA AGATATGTCG
GGCCTAAAAG CGCTGGAGAC GCTGAGCTTA CAAGGGAACA AGCTGAAGAC GATTCCCAAG
AGCGCCGCGA CGCTGCGACG TTTGCGGGCG TTGAATTTAG CCGAAAACGT CGTCGAACGA
CTTCCGAGCG AAATATCTGA GATGACGATG TTGACATCGC TTTGGTTGTA CTCAAACGCC
TTGAAAGAGT TACCGGAGAC GATGAAAAAG ATGCCGTCGC TTCGTCAGCT GTGGATCGAG
GGCAAC
 
Protein sequence
AKETKRLDLS GLGLREIPGE ARELSDLIEL QVSNNLLYEI PGDLIARFEK LERLGCAGNR 
LRALPREVGG LKSLRGIWAH GNLLNRVPEE IGNCESLRNL VLGGNRLREL PKTLGNLKNL
EELSAPGNQL TSLPDLGSMP LLREIDLHGN AIEALPEDMS GLKALETLSL QGNKLKTIPK
SAATLRRLRA LNLAENVVER LPSEISEMTM LTSLWLYSNA LKELPETMKK MPSLRQLWIE
GN