Gene OSTLU_49454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_49454 
Symbol 
ID5001380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009358 
Strand
Start bp155694 
End bp157655 
Gene Length1962 bp 
Protein Length649 aa 
Translation table 
GC content51% 
IMG OID640416801 
ProductABC(ATP-binding) family transporter 
Protein accessionXP_001417437 
Protein GI145345900 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00209815 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGATG AAGATGGCGA GTACATCGGA CCAGCCATCG ATTGGAGCGA ACCCGAGGAA 
ACGCCCGAGG ACGACGGGAA CCCGATTCCT GCGTACCTGC GCGACATCTT CGCGAAAGAC
GCCAAACCAT CGGTGAGACG TAGCTCTGGG TCCGTCACTA CGGGCGTACG ATTGGAAAAC
GTTCGTAAGA CGTTCAAGAA TATGCCAATC TTGGACGGCG TGAACTGGGA TTGTAAAAAG
GGCGAGCGCG TCGGATTAGT CGGCTGGAAC GGTGCGGGTA AGACGACGCA ATTGCGCATC
ATCACTGGTG AGATGGAAGC AGACGAAGGT GAAATCATGC TCGCGGATGG TGTGAAGATT
GGTTACCTGA CGCAAGAGTT TGAGGTCAAA GAATCCAACA CGGTTCGCGA AGAATTCATG
GCGAGTTACG GCGACGAAAC TAAAATCATG GCTGACATCG AACGCATCAA CAAAGAACTC
GAAAACAATC CAGGAATGGA GCTCGTTCAA CTCTTAGTGG ACAAGCTTTC TGATTTACAA
CGCCAGGCCG ATCGTCTGGA CTTGTTCAAG ATGGAGCGTG CGATTGATAA AATCATGCCA
GAGCTTGGCT TCGTGCCCGA AGACAACGAT CGCCTCGTTG CCTCTTTCAG CGGTGGCTGG
CAGATGCGTA TTTCGCTCGG TAAAATTTTA CTCCAAGAGC CCGGGCTTTT ACTTTTCGAC
GAACCGACAA ATCATCTCGA TCTGGACACC ATTCAATGGC TCGAAACTTA CTTGAAGTCG
CTCGACGTCC CGATGGTCAT CGTCTCGCAC GATCGCGAAT TCTTGGATCA ACTGTGCACA
AAGACTGTTG AAATTGAGCG CGGCAAAGCG ACGACTTACA AAGGTAACTA TTCGCAGTAC
TGCGCCGAGA AAGAAAGCAG AGGCGCGCAA CAGATGGTGG CGTACGAAAA ATGGCAAAAG
GAAGTGCAGC GCCAACGCGA TATGATTTCG CGTTTGGCGG GCGGCGGGCA ATCCGGTCGA
GCGACTGCGG CACAGAAAGC TCTCGATAAG CTTCAAGAAG AAGCAGTTGA AAAGCCGTGG
ATAGCAAAGA GACGTCGATT CTTCTTCCCC GACTGTCAGA GAAGCTCGCA AATTGTCGCG
CGCGTCGAAA ACGTTACTCA CGGGTACGAT GAAAAGACGC TCTTCAAAAA CACATCTCTT
GAAATCACGC GCGGCGAGCG TGTGGCCATG ATCGGTGATA ACGGGTGCGG AAAATCAACT
CTCATGCGAT TGATTCAAGG ACGCGAGACA CCGATTTCGG GTGTCGCCCA AATTGGCGAC
TCTGATTTAT GCAAGGTCAA CTACTTTTAC CAAAACCAAG CCGAAGGCTT AGACAGGAAC
AAGGGTGTAC TACAAACCCT CGTCGAAGCG GCACCGGACG CGCAGTTGAA CGACTTGAAA
GCATTGCTCG GTCAAATGGC GTTCAGCACG CCGTTTCACG AGAAGCCCGT CAAATTTCTG
TCTGGAGGAG AAAAGGCGCG CCTGGCGCTC GCCAAGTTTA TGGTGACGCC AGCAAATGTG
CTTTTGCTCG ACGAGCCAAC GAATCACTTG GATATTCCGA GTAAGGAAAT GCTTGAAAAC
GCGATTCGCC GGTTCGACGG CACCGTCATC GCCATTTCGC ACGATCGTTA CTTTTTGCGG
CAAATTGCCA CGCGCGTATT GGCTTTTGAC GAAGGTGCGA TTACCGATTA CGCCGGCGAT
TACGCATACT TCTTAGAAAA GAACGACACG GCGGGTGCTC GGGACGCCGC GCTCGAGTCT
AAGAAGAAAA AAGTCCAGCA AGATCAAATT GTTTCGAAAT CGAAGATGAG CAAGGCAGAA
AAGGCACGAT TGAAGAAGGA AAAGGCGAAG AACTTCTCGT CAGGAAGCGG CGCGGCGAAA
GCAAAGAAGA ACGCAGGGCG CTGGAATTAA TCGAATGTAC AT
 
Protein sequence
MFDEDGEYIG PAIDWSEPEE TPEDDGNPIP AYLRDIFAKD AKPSVRRSSG SVTTGVRLEN 
VRKTFKNMPI LDGVNWDCKK GERVGLVGWN GAGKTTQLRI ITGEMEADEG EIMLADGVKI
GYLTQEFEVK ESNTVREEFM ASYGDETKIM ADIERINKEL ENNPGMELVQ LLVDKLSDLQ
RQADRLDLFK MERAIDKIMP ELGFVPEDND RLVASFSGGW QMRISLGKIL LQEPGLLLFD
EPTNHLDLDT IQWLETYLKS LDVPMVIVSH DREFLDQLCT KTVEIERGKA TTYKGNYSQY
CAEKESRGAQ QMVAYEKWQK EVQRQRDMIS RLAGGGQSGR ATAAQKALDK LQEEAVEKPW
IAKRRRFFFP DCQRSSQIVA RVENVTHGYD EKTLFKNTSL EITRGERVAM IGDNGCGKST
LMRLIQGRET PISGVAQIGD SDLCKVNYFY QNQAEGLDRN KGVLQTLVEA APDAQLNDLK
ALLGQMAFST PFHEKPVKFL SGGEKARLAL AKFMVTPANV LLLDEPTNHL DIPSKEMLEN
AIRRFDGTVI AISHDRYFLR QIATRVLAFD EGAITDYAGD YAYFLEKNDT AGARDAALES
KKKKVQQDQI VSKSKMSKAE KARLKKEKAK NFSSGSGAAK AKKNAGRWN