Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_49454 |
Symbol | |
ID | 5001380 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009358 |
Strand | - |
Start bp | 155694 |
End bp | 157655 |
Gene Length | 1962 bp |
Protein Length | 649 aa |
Translation table | |
GC content | 51% |
IMG OID | 640416801 |
Product | ABC(ATP-binding) family transporter |
Protein accession | XP_001417437 |
Protein GI | 145345900 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00209815 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGATG AAGATGGCGA GTACATCGGA CCAGCCATCG ATTGGAGCGA ACCCGAGGAA ACGCCCGAGG ACGACGGGAA CCCGATTCCT GCGTACCTGC GCGACATCTT CGCGAAAGAC GCCAAACCAT CGGTGAGACG TAGCTCTGGG TCCGTCACTA CGGGCGTACG ATTGGAAAAC GTTCGTAAGA CGTTCAAGAA TATGCCAATC TTGGACGGCG TGAACTGGGA TTGTAAAAAG GGCGAGCGCG TCGGATTAGT CGGCTGGAAC GGTGCGGGTA AGACGACGCA ATTGCGCATC ATCACTGGTG AGATGGAAGC AGACGAAGGT GAAATCATGC TCGCGGATGG TGTGAAGATT GGTTACCTGA CGCAAGAGTT TGAGGTCAAA GAATCCAACA CGGTTCGCGA AGAATTCATG GCGAGTTACG GCGACGAAAC TAAAATCATG GCTGACATCG AACGCATCAA CAAAGAACTC GAAAACAATC CAGGAATGGA GCTCGTTCAA CTCTTAGTGG ACAAGCTTTC TGATTTACAA CGCCAGGCCG ATCGTCTGGA CTTGTTCAAG ATGGAGCGTG CGATTGATAA AATCATGCCA GAGCTTGGCT TCGTGCCCGA AGACAACGAT CGCCTCGTTG CCTCTTTCAG CGGTGGCTGG CAGATGCGTA TTTCGCTCGG TAAAATTTTA CTCCAAGAGC CCGGGCTTTT ACTTTTCGAC GAACCGACAA ATCATCTCGA TCTGGACACC ATTCAATGGC TCGAAACTTA CTTGAAGTCG CTCGACGTCC CGATGGTCAT CGTCTCGCAC GATCGCGAAT TCTTGGATCA ACTGTGCACA AAGACTGTTG AAATTGAGCG CGGCAAAGCG ACGACTTACA AAGGTAACTA TTCGCAGTAC TGCGCCGAGA AAGAAAGCAG AGGCGCGCAA CAGATGGTGG CGTACGAAAA ATGGCAAAAG GAAGTGCAGC GCCAACGCGA TATGATTTCG CGTTTGGCGG GCGGCGGGCA ATCCGGTCGA GCGACTGCGG CACAGAAAGC TCTCGATAAG CTTCAAGAAG AAGCAGTTGA AAAGCCGTGG ATAGCAAAGA GACGTCGATT CTTCTTCCCC GACTGTCAGA GAAGCTCGCA AATTGTCGCG CGCGTCGAAA ACGTTACTCA CGGGTACGAT GAAAAGACGC TCTTCAAAAA CACATCTCTT GAAATCACGC GCGGCGAGCG TGTGGCCATG ATCGGTGATA ACGGGTGCGG AAAATCAACT CTCATGCGAT TGATTCAAGG ACGCGAGACA CCGATTTCGG GTGTCGCCCA AATTGGCGAC TCTGATTTAT GCAAGGTCAA CTACTTTTAC CAAAACCAAG CCGAAGGCTT AGACAGGAAC AAGGGTGTAC TACAAACCCT CGTCGAAGCG GCACCGGACG CGCAGTTGAA CGACTTGAAA GCATTGCTCG GTCAAATGGC GTTCAGCACG CCGTTTCACG AGAAGCCCGT CAAATTTCTG TCTGGAGGAG AAAAGGCGCG CCTGGCGCTC GCCAAGTTTA TGGTGACGCC AGCAAATGTG CTTTTGCTCG ACGAGCCAAC GAATCACTTG GATATTCCGA GTAAGGAAAT GCTTGAAAAC GCGATTCGCC GGTTCGACGG CACCGTCATC GCCATTTCGC ACGATCGTTA CTTTTTGCGG CAAATTGCCA CGCGCGTATT GGCTTTTGAC GAAGGTGCGA TTACCGATTA CGCCGGCGAT TACGCATACT TCTTAGAAAA GAACGACACG GCGGGTGCTC GGGACGCCGC GCTCGAGTCT AAGAAGAAAA AAGTCCAGCA AGATCAAATT GTTTCGAAAT CGAAGATGAG CAAGGCAGAA AAGGCACGAT TGAAGAAGGA AAAGGCGAAG AACTTCTCGT CAGGAAGCGG CGCGGCGAAA GCAAAGAAGA ACGCAGGGCG CTGGAATTAA TCGAATGTAC AT
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Protein sequence | MFDEDGEYIG PAIDWSEPEE TPEDDGNPIP AYLRDIFAKD AKPSVRRSSG SVTTGVRLEN VRKTFKNMPI LDGVNWDCKK GERVGLVGWN GAGKTTQLRI ITGEMEADEG EIMLADGVKI GYLTQEFEVK ESNTVREEFM ASYGDETKIM ADIERINKEL ENNPGMELVQ LLVDKLSDLQ RQADRLDLFK MERAIDKIMP ELGFVPEDND RLVASFSGGW QMRISLGKIL LQEPGLLLFD EPTNHLDLDT IQWLETYLKS LDVPMVIVSH DREFLDQLCT KTVEIERGKA TTYKGNYSQY CAEKESRGAQ QMVAYEKWQK EVQRQRDMIS RLAGGGQSGR ATAAQKALDK LQEEAVEKPW IAKRRRFFFP DCQRSSQIVA RVENVTHGYD EKTLFKNTSL EITRGERVAM IGDNGCGKST LMRLIQGRET PISGVAQIGD SDLCKVNYFY QNQAEGLDRN KGVLQTLVEA APDAQLNDLK ALLGQMAFST PFHEKPVKFL SGGEKARLAL AKFMVTPANV LLLDEPTNHL DIPSKEMLEN AIRRFDGTVI AISHDRYFLR QIATRVLAFD EGAITDYAGD YAYFLEKNDT AGARDAALES KKKKVQQDQI VSKSKMSKAE KARLKKEKAK NFSSGSGAAK AKKNAGRWN
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