| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_49439 |
|---|
| Symbol | |
|---|
| ID | 5001296 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009358 |
|---|
| Strand | + |
|---|
| Start bp | 445443 |
|---|
| End bp | 449351 |
|---|
| Gene Length | 3909 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | |
|---|
| GC content | 67% |
|---|
| IMG OID | 640416717 |
|---|
| Product | DASS family transporter: 2-oxoglutarate/malate |
|---|
| Protein accession | XP_001417246 |
|---|
| Protein GI | 145345500 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0471] Di- and tricarboxylate transporters |
|---|
| TIGRFAM ID | [TIGR00785] anion transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.315345 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GCGTCGTACG CGCGCAGGTT GAGCCCGGTG CCGACGGCGA GCTCCAACAC GTCGCCCTCG
CACCGCGCGA GCGCGTCCGC GCGCAGCGCG TCCAGCCCCA GCGCGCGCGC CGCGCCGCCG
CCGTCGAGCG CGTCGTACGT CGGCGCGTAC GCGTCGTACG CCGTCTTCAC GTCCGCCGTC
TTCGCGCGCG CGTCGCCCGC GCCCAGCGCG CGCGTCGCCG CCGCCGCGAC CGCCGCCTCG
AGCACCGCGC GTCGCGTCGC CCGCGTCGCG TCGCGCGTCG CGCGCGTCGC GCCGCCGCGC
CGCCGCGTCG CGCCGCGCGA CGTCACCGCG CGCGTCGCCG CGCGCGTCGC CGCGATCGAC
GTCGCCATCG CGCCGCGCCG CCGCGCCGCC GCGATCTGCC GCACAGCGCG ACGCGCGTCG
AACGACGCGA CTTCGCCGCG CGCGATGCCG CGGCGCGCGT CGGCGCGCGA TGGCGCGAGG
ACGCGCGCGA CGGCGGCGCG CGCGGCGCTC GTCGTCGCGT GCGCGGCGCT CCGCGCGACG
CCCGCGCGCG GATATCCGTA CTACAACGCG CGCGCGTGCG GCGACGCCGC GCACCCGACG
GGCGCGGCGG GCGATCACCC GTACGCGGGC GACGACGCCG GCGTGTCGTT TTCGCTGTTC
TGGTCGGCGC ACGACGGCTC GAACGAGACG CAGGCGTGGG AGCTGTGGGA CAACAGCACG
CGGAGGCTGA TGCCGAGCTC GTGGGCGACG AGCGCGACGG GCGACGAATA TAAACCCGAG
GCGCGGTTGA CGCTGGTCGT GGACACGAGC GCGATCGCGG TCGGGATGGT GCTGCTGACG
ACGAGCGAGG GGAGGTTCGA GGACGTGAGC ATGCACGAGG CTCACGTGAG CGAGAACGGA
GGGTCGCGGA GCGCGCTGCG GTGCGGCGGA AAGCGAGTGA ACCCTTCGTT GCGGACGAAT
AAGCATAAGT TGATATGGTG GGCGCCCGCG CGCGGGACGG GGGATGTCGT CATTCGCGCG
ACGACGGCGA GCGCGGCGGA GAACGCGCTT TATCAGGGGA CGTTTACGGT GCGCGAGAAC
GACGGTTTGC AACCGCCGAG CGCGAACGGG ACGAACGCGT CGGACGTCGC GCCGGCGCAC
GATGACACCA CGGAAGTAGG AGACAGTAGC GTAGGTTCAG AGGACGAGGC GCGTCAGGTG
AGAGCGTTCG TCGTGCACGG CGGGATGATG TTCACGGGGA TTTGGATGCT CATGCCCGGC
GCCGTCGGGT GGTCGCGCTT CGGTCGACCG GGCCCGAACG ACAAGCCCTC CGCCGCGTGG
CTCTCGTGGC ACAAATGGCT CATGCTCGCC GCCGTCGCTC TCGTGGTGAT CGCGGCGGGC
ATTTCATACG CCGAAATTTC AGAAATCGGC GCCACGCATT ACGATGGCGC GCACGGCAAG
GTGGGCTTAG CCATCGTCGT CGTCGCGTGC CTCCAACCCG TCGGCGGTTT CCTCCGCCCT
CCCAACCCGC CCGAGGGCGA GCTCAAATCC CAAGCCCGCC GCACCTGGGA GCGCGTCCAC
CGCGCCGTGG GCGTCTTGAT CTTCATCCTC AGTTTCTTCG CCGTCCTATC CGGCATAGAC
GAGCTCTCCG AGCGCGACGA ATCCGTCGCC GCGCGCTTTC ACTCCGTCCT CTTCGTCCTC
TACGTCTTCG TCCTCTTCGC CTTCTTCGCT TACGCGTCGC GCCATCGCGC CGCCGCCTCC
GTCTCGCGCG CCGCGTTCGT CGAATTATCC TCGTTCGACA ATCCCTTCGC CGACGACGCG
GACGTCGACG ACGATCGCGC GTCCCTCGCG CCGCGCGGTT TCGCGCCGAG CGACGCGTGA
CGCCGCGCGC GTTTTAATCA CGCATCGCAC CGAATCGCAA TCGCATCGCA GTCGTCTCAC
TGTTTGCGCA CACGACGCGC GTCGGTCGTC GGTTAGGGTA AACGCGCGTA ACGACCTCGA
CAATCCGCGA CTCGCGCGCG TCGCCTCCGC GCCCCGACGC GCCGAAACGC TCGCGAGCGA
ACGCACGAAC GACATGTCGC GCGCCGTCGC GGCCGGATGC GCGGCGCACG CGCGCGCGAC
GACGCGAACG CCGACGAATG CGACGGCGAT GCGACGACAC CGCGCGACGA CGCGACGAGG
CGCGCGAATC GCGCCGCGCG CGGGCGACGC GAACGGCGCG CGCGAGAACC GTGAGAACGA
ACTCGCGATC GCGGTCGCGA CGACGCGAGT CGCGGCGTCG ACGCGAGCGA AACGGGAACG
CGGGACGACG ACGAAGACGC GATCGAGCGG GACGCCGAAC GCGCCGGTGG TGCGCGCGGG
ATCGGACGCG CTCGCGAATT GGAAGGGGGC GAAGCTCAAG CCGCTCGGGT ACTCGATTTT
GTCTGGGTTG ATCCTGTACC TCATTCCGGC CCCGGCCGGG GTGACGACGC AGGCGTGGAA
CTTGCTCGCG GTTTTCGTGG CGACGATCGT CGGGATCATC ACGAACCCGC TGCCGCTCGG
CGCGGTGGCG ATGATCGGGC TCGGCGTGAG CATGACGACC GGGTTGTTGC CGTTCTCGGC
TGCGTTCTCG GCGTTCTCGA GCGAGATTCC GTGGTTGATT GCGCTCGCGT TCTTCCTCGC
CCGCGGGTTC ATCAAGACGG GTTTGGGCAA CCGCATCGCG TACAAAATCG TGAGCTTGTT
CGGCAAATCC ACGCTCGGTT TGACCTACTC CTTGGTGTTC TCCGAAGCTT TGCTCGCGCC
AGCCATCCCT TCTTTGGCCG CACGCGCGGG TGGTATCTTC TTGCCCCTCG CCAAGGCGCT
CTGCGTCGCG TGCGGCTCCG ATCCCGCCAA CGGCACGGAG AAGAAGATGG GCGCGTACGT
CATGACCACC GTGTTCCAAA CCTCTACGAT CTCTTCCGGT ATGTTCATCA CCGCCATGGC
CGCTAACCCG CTTAGCGTGA ACCTGGCGGC GTCCATCACG GGCATCACCA TCTCCTGGGC
TCAGTGGGCC ATCGGTGCTC TCGTGCCGGG TATCATCTGC CTCGTCGCCA CGCCGCTCAT
CCTCTACGTC TTGTATCCGC CGGAAGTCAA GGACTCGCCA GACGCTCCGG TCAAGGCGCA
AGAAGAGCTC GCGAAGCTCG GTCCGATGTC TGTTGACGAA AAGATCATGG CTGCTGCCTT
GTCTCTGACC GTGGGTCTCT GGATCTTTGG TTCCAAGTTC GGCGTCGGCT CTGTCGCCGC
CGCGCTCAAC GGCTTGGCCA TCCTCCTCGT CTCCGGTGTC ATCACCTGGA AAGAATGTCT
TGCCGAAGGT CCGGCTTGGG ATACGCTTGT GTGGTTCGCC GCGCTCATCG CCATGGCGGG
TTACTTGAAC ACGTACGGTT TGATTCCGGC TTTCTCCAAA GGCGTCGTCG GCGTCGTCTC
CGGCCTCGGC TTGGCGTGGC AACCGGCCTT TGTCATCGTG ACTCTCGTCT ACTTCTACTC
TCATTACCTC TTCGCCTCTG GTGCGGCGCA CATCGGTGCC ATGTATAGCG CCTTCTTGTC
GGTGCTCATC GCGTGCGGTG CGCCGCCTCT CGTATCCGCC TTGACCCTCG GCATCTTGTC
CAACGTCATG GGCTGCACCA CGCACTACGG CATCGGCTCC GCGCCACCTT TCTTCGGTGC
CGGCTACGTG CCGCTCGCCA CCTGGTGGAA GATCGGTTTC GGTATGTCCA TCTTCTACAT
CGCCACCTTT TTGGGCGTCG GTTTCCCGTG GTGGAAGATC CTCGGCTACT GGTAGGCCAA
ACGTTGTCGC GCTACCAGGC AACTGCGAGA GCAGTTGGTT TTGGACAATA ACACATGTAC
GTCGTCAAAC GCGCGCGCGC CCCGCATCAA TACCGCGCGA ATATTCGCGT ACGTTGACGT
GGCATAGTT
|
|---|
| Protein sequence | MIGLGVSMTT GLLPFSAAFS AFSSEIPWLI ALAFFLARGF IKTGLGNRIA YKIVSLFGKS
TLGLTYSLVF SEALLAPAIP SLAARAGGIF LPLAKALCVA CGSDPANGTE KKMGAYVMTT
VFQTSTISSG MFITAMAANP LSVNLAASIT GITISWAQWA IGALVPGIIC LVATPLILYV
LYPPEVKDSP DAPVKAQEEL AKLGPMSVDE KIMAAALSLT VGLWIFGSKF GVGSVAAALN
GLAILLVSGV ITWKECLAEG PAWDTLVWFA ALIAMAGYLN TYGLIPAFSK GVVGVVSGLG
LAWQPAFVIV TLVYFYSHYL FASGAAHIGA MYSAFLSVLI ACGAPPLVSA LTLGILSNVM
GCTTHYGIGS APPFFGAGYV PLATWWKIGF GMSIFYIATF LGVGFPWWKI LGYW
|
|---|
| |