| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_4809 |
|---|
| Symbol | |
|---|
| ID | 5004919 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009366 |
|---|
| Strand | + |
|---|
| Start bp | 331367 |
|---|
| End bp | 332101 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | |
|---|
| GC content | 63% |
|---|
| IMG OID | 640420340 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001420658 |
|---|
| Protein GI | 145352664 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3129] Predicted SAM-dependent methyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.142691 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.0000526989 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | GCGGTGGTGG ATTTTAAGGA CTGGGACAGC ACGCGCGCGC TGACGGGGGC GATCCTGCGC
GAGGAGTACG GGGTGGAGGC GTGGACGGTG CCGCGCGGGC GGTTGGTGCC GACGGCGACG
AATCGAGAGC GGTATTTGGA GTGGTTGGCG CGGTTGCGCG CGCTGTCGGC GCCGAGCGGT
GACGACGCGA GCGTGTGGGT GCTAGATATC GGGACGGGGG CGAGCGCGAT ATACGCGCTG
CTCGGCGCGG CGGGACGCGG GTGGCGCTTC GTCGGCACCG ACGTGTGCGA CGAAGCGTTG
ACGAGCGCGA GGGAGAACGT GCGACGGAAT CCGCACTTGG AGTCGCTGAT CGAGATACGG
GACGCGCGGG GTGAAGATGG GGCGCGCGAT CGCGTGCTTC GAGGCGTGGT GAGGGATGGG
GAGACGTTTA CGTTTTGTAT GTGTAATCCG CCGTTTTTCG AAACGATGGA CGAGGCGGGC
AGGAATCCGA ACACCGCGTG CGGGGGCACG GCGACGGAGA TGGTGTTTCC AGGAGGCGAA
GAGGCGTTCG TAAAGAAAAT TTTCGCGGAT TCGTTGACAA TGAAGGATTC GATTCATTGG
TTCACGACGA TGTGCGGGAA AAAGAGCACG ATGACGACGA CGCGCTCGTT CCTTCACACG
CATCGCGTGC CCGCCATTCG CACGACGGAA CTTTCGCACG GGAAAACGTC GAGATGGTGC
ATCGCGTGGT CGTTT
|
|---|
| Protein sequence | AVVDFKDWDS TRALTGAILR EEYGVEAWTV PRGRLVPTAT NRERYLEWLA RLRALSAPSG
DDASVWVLDI GTGASAIYAL LGAAGRGWRF VGTDVCDEAL TSARENVRRN PHLESLIEIR
DARGEDGARD RVLRGVVRDG ETFTFCMCNP PFFETMDEAG RNPNTACGGT ATEMVFPGGE
EAFVKKIFAD SLTMKDSIHW FTTMCGKKST MTTTRSFLHT HRVPAIRTTE LSHGKTSRWC
IAWSF
|
|---|
| |