Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_45407 |
Symbol | |
ID | 5001440 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009358 |
Strand | + |
Start bp | 497654 |
End bp | 502182 |
Gene Length | 4529 bp |
Protein Length | 938 aa |
Translation table | |
GC content | 51% |
IMG OID | 640416861 |
Product | VIC family transporter: calcium ion channel |
Protein accession | XP_001417264 |
Protein GI | 145345538 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000016856 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | CTGCAGATGT TTGTGAAGCA CAAGTATTTC GAAAATGGTA TAACTAGTGC GATTGTGGTA AATACAATCA TACTGGCGGT GCACTTTCGT GGTATGGGGA GCGAGATGGA GACAGCTGTG AATAATCTGA ATTACTTGCT TTTGTCAGTC TTCGTGTTCG AGTTGGTGAT GAAAGTACTC GCATTCGGAA TTTTAGGATA TAGCAAGGAT CGCTACAATT TGTTCGACGC GACTGTTGTC ACTGCCGGTC TGATAGAGCT GGCATATCGT AACAGCAGCT TGGCCGTCGC ACGCGCGTTC CGTCTGTTGC GAGTGATGCG CACGACTCGC CTCATCACAA GAAACAAGAA CATGCGGCGT TTGATAGATA CCACCATGGA GAGCTTCAGT GCTATTCTGA ACTTTTGCGG TGTCCTATTC GTCTTTGTTT TCGTCTTCAC GGTTTTAGGC ATGCAGCTAT TTGGTGGACG CGACGAGTTT TGGGATGCGC GGCCGAATTT CAACACCTTT GGGGATAGTT TTCTCTCTGT ATTCGAGATT CTGACGGGAT CGCATTGGTA CAAGTTGATG CTCGTCGCCA TGAGTGGCTC GTACGGCGCC CCTGCAGCCT TGTTTTTCAT TTGCTGGTCC TTCATCGGTT CATTTGTGCT GTTGAATCTC ATCGCGGCGA TGCTCATTGA CACATTTTCA CGCACGATGC GAGCAAAGGA GCTCGAACTC GAGCGTTTGC GCGAGGAAAA GAAAGAGACG GAACGCCGAG AGGCCGAGGC CAAACGTCAA CGAGAAATCA ATACTCTTCT CGAGGGAAAC AATGATGATG AGATGGATAA GGTGGAAGTG CACCAGGAAG GCATAAGCAC GGAGTTAACA CGGTTGATGA AACCAAACGA GATTCGACGC CATCCGGATG CCAAGCGCAT CGTGAATAGG ATGAATACAC GCAAACAGCG AGCATTTGCG AGAGAGGTGC AGCTGATAGA AAGGTGGCTG GAGATAATAG GTTTCACAGA AAATGATAGT GATGTTGACA GCGATAGTGA AGACAACGCG GTGGATGCCA ATGAACAGCT CGTCAAGGAC CGAGCACTTT TAGTTGACGA GTTGGCGGTT GATGATGGCG TGCCAGAGAG CCAACTGACG ACGCTCATGC GAGAAAAGGC ATCTAGAAAA GTATCCGCAC TTGTCGCTAC TGGTATCCCG ATTCCCATGG ATGATCGCCA GGTAAGGGCG GCCTATCGAC GTTGGAGAAT TGACGCGGCG GCGGAACAAG GCAGCGATAG CGACGAAGAC ATGAATATCC AGAACACAAA CACACTACGG GATGAGTACG GCGGTACAGC GGACGGCACG GCTGCCAGTG CAATGGAGGT CCGAAGACAC TTGCAAGAAC ATGCGCTCGC TGAACTTCGA CGCAGTCTGT TGGAGCGTAG CGGCGAGTCG GGTACTAAAG ACGCGCTTCA ATGGGCGTCG CAGGCGCCCA CAATTGGCTT GGCGATGAAG AGCGCGGAGG CTCGGATGCG ACCAGAAGAA CAAACTGCGA TCATCGCACA ACGTCGAGCG GAGGGCAACA AAAGTGGTCA TCTCGGCAAA TTCAAAGGAG ACGGAATGAG CGCCGAAGGC GCTGCCGCAA TCGCCGAGGC AAATTTGCTG AGCATGCGAA TTCGCGAATC AGAGCGCTTG GAAGCTATAA AGAAGAAACG TGGCCAATCA GTCGACGAGG ACGTGCCCGC GGCGTCCGAC GACGTCGACG CCAACGATGG ACTAGCTCCA TCACCTGTCA ATCCGCCGAC GGAGCGGAAG ACGGCTTCTT GGCGCGCCAG GGTGAAATCT ACGCAGCCTG GCGAAGAACG CAAGTCGTTG TCGGAATCGC TGCGAGGTAT GGCTGATAGA CCAAGACCCG GTCCCGTGAC AGAGTCTTTC AACGAAGATA ACATATCTAG TGCGTCACCG AGCAGAGATG GAGATACGAT GTCAAATTCA CACTCGGCAC GAAGTCCCCG CAACTCGCGT TCACGCGGTT CGCAAACAAC TGGAGATTCT GCGCACGCGT ACAACACCCT CGTGCCCATC GTGGAGTATA CGTCGATGCC ACCCTTGCTG AACATAGACT ACAGCCTCCC GAGGATATCC GAAGACGTAC ACGCCGGTAA AGCCAGGAAG GCGTTGGGAT TACCCGTGCG TGACATCGTT GTTGATGAGA CGAAAATTGA CAAATCTTCA AAGAAGAACA TCGCCGAAGA GGACTGGTTA CGCAATGCCG GTGCGACAAA GGATGAGATT TGCATGATGT ACCCGTCGTT GGGTTTCATC AAGCCGCGAC GCCCGATGCG ACGTTTGCTA TTCATGCTTA TCAAGCATCC CGCGTTTGAG GCGCTCATGC TCGTTCTCAT CGTATTCTCG TGCATCCAGC TCGCGCTCGA CGCGCCCACA GTGCATCCAG AAAGTGATTT GGCCAGCGTT CTCAAAGCAG CGGACGTATC TTTCACGCTC ATATTTTTGG GCGAGGCAAT CATAAAAGTA ATTGCGATGG GCTTCGTTAT GCACCCAGGA GCATACCTTC GATCTCCTGC GAACTGCTTT GACTTTTTCA TTGTCATCGT ATCGCTCGCC GTCGAAACCA TGAGCGCGTC AGCACTGAAG TCTATGCGCA GCTTCAGGTT ATTTCGAGCT CTGCGTCCTT TGCGCCTGTT AAATCGAGTT AAGAGTATGC AAATCGTCGT TGCGACGCTG CTTCACGTCC TACCTGATCT TGGGAGTGTG ATGCTGTTGG GATTGTTTCA GTTTTTGATT TTCGCAATTC TGGGCTCGCA GTTATTTGCT GGTAAATTTG ATTACTGCAA CGACCCTACG GTCTCTGGAA TGCACGCGTG CGTCGGGACG TTCGTTGACG AGAAAGGTGC ACACGTGACT CGCCGGTGGC TCAATCCGCC ACTGAACTTC GATAACACCC TGCTCGCTCT ACTGAGTCTC TTCGTCATCG TCACACGTGA CGGATGGCTT TCTGTAGCGT TTCAAGGCAT GGACTCAACG GATACGGACT TGCAGCCATC TTTAAACAAC AGTGGCTGGA CAGCTATTTA TTTTTTGAGC TTTATTGTGA TCCTCTCTTT CGTCTGGTTG AGTATGATCG TCGCCCTCGT GTGCGAGAGT TACAAGAAGG CTTGTGTGTT GAGCAACTCG ACGCAGACGC TCAACGCCGA GCAGCAAGAG TGGGCGGAAG TTTTGCGTAT GAAAAAACAC GACGCCGAGC TCAAAATATT GGATGACGAC ACAACCGGGG CGCCACGGTT TTTCATTCGA AAATCGGCTT ACTCCTTAGC CACGAACCCT CGATTTGAGG CTTTCATCGT TGGCTGCATC ATTGCCAACA CTATCACCAT GGCGTCGTAT CACGACGGAC AACCGAAAGC CTATGCCGAA ATTCAACGAG CGGCGAATGT GTTTTTCTCT TGGATCTTCT TGTTAGAGCT CTCGTTGAAA ATGGTCGCAC TGTTCCCGAA ACGTTACTTT TCAGAGCGCT GGAACGTGTT TGATTTCATC ATCGTCGTGG CTAGTATTCC CGACCTCGCA GGTGTGGATT TCGCCGGTAC CACGGTGCTC CGCGTCATCC GACTTGGACG CGCGCTACGT CTGTTTAAAC AAGCGAAGGG TCTACGTACG GTTTTCAATA CGCTATTGAG CTCCTTTGAA AGCGCGTTTA ACGTCGTTTT CCTGATATTC ATGTTGATGT TTGTGTACGC GGTGCTTGGC ATGAATCTCT TCGGCGACTA CGAAACCACG TATCCGAGTG GACGTGTGGA GAACTTTCGG AACTTTGGCG CATCGCTTAT GGTTCTCTTG CGAGTCATCA CGCGTGATAA TTGGAAGCGT ATCATGTTCG ACACGATGAA ATGTGAATAC AATGTGGACG GCGTCGCGGC GAATTGCAGT TACATCTTCG TCCCGGCGCT CTTCTTCACG AGCTTCATAT TGTTGGGGGC GTACGTGTTG TTGAGCCTTA TCATCGCCTC CATTTTGGAC AAATTTACTG AAAACGCTGT GAACGAGGGC CTGCTTTCGA CGGCGAATAT ATTCGTCACT GTCCGTCGAA AGTTGCTGCT TGACACGTTT TCCACCAAGC TCAAGATGAA GCTCGACTCG TTCAAAGTGA AGAAGCCCAC GAGAGGGGCA CGAAAGAAAA AGTAGGACTC GATGAAAGTG TCGAGTGTGT AAAGTAGCTC TATGAAATGG AAATGATTAT AAATGGTCAC TTAAGCATGA TTTACAGCGG TCTGCGATGT GGTTACAGAG GCGGCAGTGA AGAATACAGG TGAGTCAATA GAAGTCAATC GACTTCAGCG CGCGTGCGTT TCTGATGAAT GTTCGTAAAT GGTACCAGTG GATTATTTTT CAGTCTTTTC TTTCTGCTCG GATGTTTCAT TCTCAGTCTT GATGGCTTTT ATCTTTGCCG ACGTTGTCGC CGTTACGGAA GTGTTTGCGG CGGGCGCCAC CGAGCCAAAG CCGTATGGAT TTTGCATCGC TCCTTGGAA
|
Protein sequence | MFVKHKYFEN GITSAIVVNT IILAVHFRGM GSEMETAVNN LNYLLLSVFV FELVMKVLAF GILGYSKDRY NLFDATVVTA GLIELAYRNS SLAVARAFRL LRVMRTTRLI TRNKNMRRLI DTTMESFSAI LNFCGVLFVF VFVFTVLGMQ LFGGRDEFWD ARPNFNTFGD SFLSVFEILT GSHWYKLMLV AMSGSYGAPA ALFFICWSFI GSFVLLNLIA AMLIDTFSRT MRAKELELER LREEKKETER REAEAKRQRE INTLLEGNND DEMDKVETKI DKSSKKNIAE EDWLRNAGAT KDEICMMYPS LGFIKPRRPM RRLLFMLIKH PAFEALMLVL IVFSCIQLAL DAPTVHPESD LASVLKAADV SFTLIFLGEA IIKVIAMGFV MHPGAYLRSP ANCFDFFIVI VSLAVETMSA SALKSMRSFR LFRALRPLRL LNRVKSMQIV VATLLHVLPD LGSVMLLGLF QFLIFAILGS QLFAGKFDYC NDPTVSGMHA CVGTFVDEKG AHVTRRWLNP PLNFDNTLLA LLSLFVIVTR DGWLSVAFQG MDSTDTDLQP SLNNSGWTAI YFLSFIVILS FVWLSMIVAL VCESYKKACV LSNSTQTLNA EQQEWAEVLR MKKHDAELKI LDDDTTGAPR FFIRKSAYSL ATNPRFEAFI VGCIIANTIT MASYHDGQPK AYAEIQRAAN VFFSWIFLLE LSLKMVALFP KRYFSERWNV FDFIIVVASI PDLAGVDFAG TTVLRVIRLG RALRLFKQAK GLRTVFNTLL SSFESAFNVV FLIFMLMFVY AVLGMNLFGD YETTYPSGRV ENFRNFGASL MVLLRVITRD NWKRIMFDTM KCEYNVDGVA ANCSYIFVPA LFFTSFILLG AYVLLSLIIA SILDKFTENA VNEGLLSTAN IFVTVRRKLL LDTFSTKLKM KLDSFKVKKP TRGARKKK
|
| |