Gene OSTLU_4539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_4539 
Symbol 
ID5002009 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009359 
Strand
Start bp731305 
End bp732406 
Gene Length1102 bp 
Protein Length328 aa 
Translation table 
GC content58% 
IMG OID640417430 
Productpredicted protein 
Protein accessionXP_001418095 
Protein GI145347267 
COG category[R] General function prediction only 
COG ID[COG1310] Predicted metal-dependent protease of the PAD1/JAB1 superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.251413 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CCTCCCATCA CGACCTCGGA CGAACTCTAC GCATACGATG AAGTCGCGCA CAAGCTCCTC 
GTCGCTCAAA AGCCTTGGGC GCGCGATCCT CACTACTTTA AGAGGTAACG GTTGTCCCCG
GCAGATTGCG CTCGCAATCG CACTTTTCTC GAGTCGCACG CCGCGCGCGA CGCGTCCGGG
CGACTGACGA CGGCGCGAAA CGCTCGCGCG TTTATGTTCT AGGGTAAAGG TGTCCGCGCT
GGCGCTGATG AAGATGACGG CGCACTGCAA ACGCGGTGGG GATATCGAAG TCATGGGCAT
GCTGCAAGGG TACGCGAAGG ACGACGCCTT CATCGTGCTG GACGTGTTCG AACTCCCGGT
CGAAGGCACG GAAACGCGCG TCAACGCGCA GGCGGAGGCG TATGAATACA TGGTGGAGTA
TACGCACACG TGTAAGGCGG TCGGGAGACA CGAAAACGTC GTCGGGTGGT ATCACTCGCA
TCCAGGATAC GGCTGCTGGT TGTCGGGCAT CGACGTGAAC ACGCAGAGCA TGAATCAGAG
GTACGGGGAA CCGTTTTTAG CCATCGTCAT CGATCCGATC CGGACGAGTC GCGCGGAAAA
GGTGGAGATT GGAGCGTTTC GGACGTATCC GGATGGATAC ACCGCGCCCG AGGAGCCGTC
GACGTCGAGT AATCTAGGAA TCCCAAAGAG CAAGATAGAA GACTTTGGCG TACACGCGAA
CAAGTATTAC TCGTTGGATG TGAGCTTTTT CAAGAGCTCG CTCGACGCGC GTAACTTGGA
TTCGTTGACG AAGAAGTATT GGGTCAACAC ACTCAGTTCG TCGACGCTGC TGGCGAATCG
AAAACTCATC GCGAGTCAAG TCTCGGACAT GGAGGGGAAG ATTGCCAAAG CCGAAAAGGA
AATCAAGCGA GGCGGTCCGA CGACGACGTC TTCGGCGTCG CTCGCCTCGA TGTCGATGTC
CCCGACGTCG GGATCGAATT TAGAGAAAGC AGGCGATGTT TCCGCGCTCG GCACGGTGAC
GCAAGACGCG ATATCGCTCG CGATAGAGCA ATCGAAAATG TTCGCGTCGT ACGCCGTCAA
ATGCGCCCTG TTCGACGCCG TC
 
Protein sequence
PPITTSDELY AYDEVAHKLL VAQKPWARDP HYFKRVKVSA LALMKMTAHC KRGGDIEVMG 
MLQGYAKDDA FIVLDVFELP VEGTETRVNA QAEAYEYMVE YTHTCKAVGR HENVVGWYHS
HPGYGCWLSG IDVNTQSMNQ RYGEPFLAIV IDPIRTSRAE KVEIGAFRTY PDGYTAPEEP
STSSNLGIPK SKIEDFGVHA NKYYSLDVSF FKSSLDARNL DSLTKKYWVN TLSSSTLLAN
RKLIASQVSD MEGKIAKAEK EIKRGGPTTT SSASLASMSM SPTSGSNLEK AGDVSALGTV
TQDAISLAIE QSKMFASYAV KCALFDAV