| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_44322 |
|---|
| Symbol | |
|---|
| ID | 5004390 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009365 |
|---|
| Strand | + |
|---|
| Start bp | 419949 |
|---|
| End bp | 421616 |
|---|
| Gene Length | 1668 bp |
|---|
| Protein Length | 555 aa |
|---|
| Translation table | |
|---|
| GC content | 58% |
|---|
| IMG OID | 640419811 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001420333 |
|---|
| Protein GI | 145351972 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1160] Predicted GTPases |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR03594] ribosome-associated GTPase EngA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.00480829 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0297324 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCGCG AGGCGCGGAC GTACGCCACG GCGTGGGCGA ACGAACTGGC GAGCACGCTG
TCGGAGGACG CGAGGGCGCT GGAGCGAAGG CTGTTCGGCG ACGAAGGCGG CGCGAGCGAG
CGCGGCGAGG ACGAAGACGA AGACGCGAGC GAGGAAGAGA CGGTCGGGAC GAGCGGGAGG
AAGGGGAAGG CGCGCGCGGA CGCGAGAGTG CGAAGGAAGA CGCGACGAGA TTGGAGTAAA
GTGCCGGACG AGGCGCTGCC AAGAGTCGCC GTCGTGGGAC GGCCAAACGT GGGGAAGAGC
GCGTTGTTTA ATAGACTCAC TGGAACGAAA CGGGCGATCG TGTACGACGA GCCGGGGGTG
ACGCGAGATC GGATGTATGT GCGCGCGTAT TGGGGCGAAC ACGAGTTCAT GATGGTGGAC
ACGGGCGGGT TGGAAAATTT ACCGGCCAAT CCCGAGGGTG GGCCGAAGAC GGACACCGTC
GGCGGCGTCG AAATCTTACC TGGGATGATC GAGGCGCAGG CCGCGGAGGC TGTGCGAGAA
GCGTCTGTGC TCATTTTTGT CGTCGACGGT CAAGTTGGGC TGACGGCGGC GGATATGGAT
ATTTTCGCCT GGTTGCGTCG CACGCACTCG AAAATACCGC TCCATCTGGC GGTGAACAAG
TGCGAGAGCA CGACGAAGGG GGAGGACCAA ATCCTCGAGT TTTGGTCTTT AGGCGACGTT
ACCCCACTCG CTGTTTCCGC CATCAGCGGC ACCGGGACCG GGGAGCTTTT GGATAACATG
TGCGCGACTT TGCCGCCGCC TCCGCAAGTC TCCGAGGATG AAAACGCAGA GGAGGAAGAT
ATTCCCGTCA CAGTCGCCAT CATCGGCCGA CCGAACGTGG GGAAGAGTTC GTTGTTGAAT
GGTTTGGCCG GTGAAGCGCG ATCGATCGTG AGCGACTTTT CTGGTACCAC ACGAGACAGC
ATCGATACCT TGGTCGAGGA CAAGTACACG GGGCGAAAGT TTACACTCAT CGATACGGCG
GGCATTCGGC GACGAACTCA AGTGAAATCC GGCACGGATG GAGCCGAAAA ACTCAGCGTC
GGTCGCGCTT TGCAAGCGAT GAAGCGTGCA GACGTAGTGG TGCTAGTTAT AGATGGTACT
GAAGGACCGA GCCAACAGGA TTTTGTACTC GCCGAGCGCG CCACGCAAGA GGGCTGCGCC
ATCGTGTTGT GCATCAACAA GTGGGATTTG GTGGACAAGG ATACGCACAC GATGAACAAG
TATACGGACG ATATGCGATT AAAGTTGCGT GTGTTTGAAT ATGCCGAAAT TGTGTACACG
TCTGCGCTCA CTGGACAGAG AATCCAAAAG ATTTTAGACG CCGCGCAGGT GGCGAGCGAG
AATCACCGCA AACGTCTCAC CACGGCGACG CTCAACTCTG TCGTACAAGA GGCGACTTTG
TGGAAGCTCC CGCCGTCGAG AAACAGCAGA AAGGGTAAGA TTTATTACAT CACGCAAGCG
TCGATACGTC CACCGACGTT CGTCTTTTTC GTGAACGACC CCAAGCTGTT TCCGGACACG
TACCGTCGGT ACATGGAGCG CCAACTGAGA GAGAACATCG GCTTCCCGGG AACTCCGATT
CGCTTGCTGT GGAGAGGAAA GGGCGTCGAA AAAGGGCCGA GGAAATAA
|
|---|
| Protein sequence | MDREARTYAT AWANELASTL SEDARALERR LFGDEGGASE RGEDEDEDAS EEETVGTSGR
KGKARADARV RRKTRRDWSK VPDEALPRVA VVGRPNVGKS ALFNRLTGTK RAIVYDEPGV
TRDRMYVRAY WGEHEFMMVD TGGLENLPAN PEGGPKTDTV GGVEILPGMI EAQAAEAVRE
ASVLIFVVDG QVGLTAADMD IFAWLRRTHS KIPLHLAVNK CESTTKGEDQ ILEFWSLGDV
TPLAVSAISG TGTGELLDNM CATLPPPPQV SEDENAEEED IPVTVAIIGR PNVGKSSLLN
GLAGEARSIV SDFSGTTRDS IDTLVEDKYT GRKFTLIDTA GIRRRTQVKS GTDGAEKLSV
GRALQAMKRA DVVVLVIDGT EGPSQQDFVL AERATQEGCA IVLCINKWDL VDKDTHTMNK
YTDDMRLKLR VFEYAEIVYT SALTGQRIQK ILDAAQVASE NHRKRLTTAT LNSVVQEATL
WKLPPSRNSR KGKIYYITQA SIRPPTFVFF VNDPKLFPDT YRRYMERQLR ENIGFPGTPI
RLLWRGKGVE KGPRK
|
|---|
| |