Gene OSTLU_43750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_43750 
Symbol 
ID5006544 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009374 
Strand
Start bp112086 
End bp112874 
Gene Length789 bp 
Protein Length149 aa 
Translation table 
GC content63% 
IMG OID640421965 
Productpredicted protein 
Protein accessionXP_001422486 
Protein GI145356540 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5078] Ubiquitin-protein ligase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0110987 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTCGA AGAGAATCAT TAAAGAACTT TTGGGTGCGT TTGCTCGTCG CGCTCGCGCG 
CGCGAGGCGT CGTCGCGCGA CGCGCGCGCG CGTCGTGAAG ATCGTCGCGG AATCGCGCGG
CCGACGCGGT CCGACGCCGA CGCGGCCTGG GACGCGCGCG ACGCCGTCCC GAGGCGCGCG
CGCGCGCGAA AAGATGCGAC GCAATATCCC GCATCGCGCG GCTCGGCGCG CGCGCGCGCG
GAACGCGCGC GCGGCGCGTC GTCGTCGTCG ACGACGCGTC TCGGGCTGAC CGACGTCTTC
GCGCTTCGAT CGATACGAAA GCGCGTTCGC TCGCGCGCGG ATGACTGACG ACGCGCACGC
GCGACGCGAA CAGATTTGCA AAAGGACCCG CCGACGTCCT GCAGCGCGGG CCCGCGGTCG
GACGATGATA TTTTCCACTG GGACGCGACG ATCATCGGAC CGAGCGACTC GCCGTACCAA
GGCGGACTGT TCTTCGTCGC GATTCACTTC CCTCCGGATT ACCCGTTCAA ACCGCCGAAG
GTGAATTTCA AGACGAAGGT GTATCACCCG AACGTTAACA GCCAGGGGTC GATTTGTTTG
GATATCTTGA AGGAGCAGTG GTCGCCGGCG TTGACGATTA GCAAGGTGCT TTTGAGCATT
TGCTCGTTAT TGACGGACCC CAACCCGGAT GATCCCTTGG TTCCGGAGAT CGCGCACATC
TATAAGACGG ATCGTAACCG ATACAACGAT CTCGCGAAGG AATGGACTAG GAAGTACGCC
ACTTTGTAG
 
Protein sequence
MASKRIIKEL LDLQKDPPTS CSAGPRSDDD IFHWDATIIG PSDSPYQGGL FFVAIHFPPD 
YPFKPPKVNF KTKVYHPNVN SQGSICLDIL KEQWSPALTI SKVLLSICSL LTDPNPDDPL
VPEIAHIYKT DRNRYNDLAK EWTRKYATL