Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_43750 |
Symbol | |
ID | 5006544 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009374 |
Strand | + |
Start bp | 112086 |
End bp | 112874 |
Gene Length | 789 bp |
Protein Length | 149 aa |
Translation table | |
GC content | 63% |
IMG OID | 640421965 |
Product | predicted protein |
Protein accession | XP_001422486 |
Protein GI | 145356540 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5078] Ubiquitin-protein ligase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0110987 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGTCGA AGAGAATCAT TAAAGAACTT TTGGGTGCGT TTGCTCGTCG CGCTCGCGCG CGCGAGGCGT CGTCGCGCGA CGCGCGCGCG CGTCGTGAAG ATCGTCGCGG AATCGCGCGG CCGACGCGGT CCGACGCCGA CGCGGCCTGG GACGCGCGCG ACGCCGTCCC GAGGCGCGCG CGCGCGCGAA AAGATGCGAC GCAATATCCC GCATCGCGCG GCTCGGCGCG CGCGCGCGCG GAACGCGCGC GCGGCGCGTC GTCGTCGTCG ACGACGCGTC TCGGGCTGAC CGACGTCTTC GCGCTTCGAT CGATACGAAA GCGCGTTCGC TCGCGCGCGG ATGACTGACG ACGCGCACGC GCGACGCGAA CAGATTTGCA AAAGGACCCG CCGACGTCCT GCAGCGCGGG CCCGCGGTCG GACGATGATA TTTTCCACTG GGACGCGACG ATCATCGGAC CGAGCGACTC GCCGTACCAA GGCGGACTGT TCTTCGTCGC GATTCACTTC CCTCCGGATT ACCCGTTCAA ACCGCCGAAG GTGAATTTCA AGACGAAGGT GTATCACCCG AACGTTAACA GCCAGGGGTC GATTTGTTTG GATATCTTGA AGGAGCAGTG GTCGCCGGCG TTGACGATTA GCAAGGTGCT TTTGAGCATT TGCTCGTTAT TGACGGACCC CAACCCGGAT GATCCCTTGG TTCCGGAGAT CGCGCACATC TATAAGACGG ATCGTAACCG ATACAACGAT CTCGCGAAGG AATGGACTAG GAAGTACGCC ACTTTGTAG
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Protein sequence | MASKRIIKEL LDLQKDPPTS CSAGPRSDDD IFHWDATIIG PSDSPYQGGL FFVAIHFPPD YPFKPPKVNF KTKVYHPNVN SQGSICLDIL KEQWSPALTI SKVLLSICSL LTDPNPDDPL VPEIAHIYKT DRNRYNDLAK EWTRKYATL
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