Gene OSTLU_43450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_43450 
Symbol 
ID5006636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009374 
Strand
Start bp397222 
End bp398436 
Gene Length1215 bp 
Protein Length404 aa 
Translation table 
GC content63% 
IMG OID640422057 
Productpredicted protein 
Protein accessionXP_001422578 
Protein GI145356728 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases 
TIGRFAM ID[TIGR01474] 4-hydroxybenzoate polyprenyl transferase, proteobacterial 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0229957 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0842835 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGCCG CCGCGCGTCG CCGCGCGTCC GCCGCGCGAG CGTCCACGGT CGAAGCGTGC 
GCGCGAGCGC TGGCGTCGGG GTCGGCGACG CGCGCGCGGG CGTCGGCGTG CGCGAACGCT
GCGCGCGGGA CGTGGGCCGA AGCATCGACT TCAACGCCGC CTCGCGCCGC GCACGCGAGC
TCTTTCGTCG CTCGACGACC GAGAACGGGC GATGGTGAAT ATTTCCGTTC GTTCGCCGCG
TCGGCGTCGA CGTCTCACTC GTCGAGGGTG AAGGCGGACG AAGAAGCGTC GTCGGCGTCG
TCGGCGGCGA CGCCGGCGCC CGAGGCGGAG AACACCTGGG TCGATCGCGT CGTTCCCTCG
TCCTTGGTGC CGTACGCCAA GCTCGTGAGA TTGGACCGAC CTATCGGGAC CGCGCTTTTG
GCGTGGCCGT GCTTCTGGTC GATCGCGCTG GCGGCGGACG CGGGCGCGCT TCCGGACGCG
CGTCTGCTCG GACTGTTCGG CGTCGGAGCG CTTCTTCTTC GAGGCGCGGG GTGCACGGTG
AACGATCTGT GGGATCGAGA CATCGATAAT AAAGTTTCGC GCACGCGTAA CCGCCCGATC
GCGAGCGGGG CGGTGAGCGT TCCGAAAGCC ATATTGTTTT TAGGCGCGCA ACTCGCGCTC
GGACTCGGCG TGTTGGTTCA GCTGAACGAT TATTCAAAAA TTCTGGGCGC GAGTTCGTTG
GCTCTCGTCG CAGCGTATCC CGCCATGAAA CGCATCACGA ATTATCCACA GGCGTTTCTC
GGGTTGACGT TTAATTGGGG GGCTTTGCTC GGCTGGGCCG CCGTGCACGG CTCGTGCGAC
TGGGGCGCGG TGCTGCCGCT CTACGCCTCA GGCGTGGCGT GGACTTTGGT GTACGACACT
ATTTATGCGC ATCAAGATAA GCACGACGAC GCCAAGGTCG GTATCAAGTC GACTGCGTTG
CACTTTGGTA AAGACACAAA GAAATATTTA GGAGCGTTCG CGCTCGCCGG CACTTCGGCG
CTTTGCGCAT CTGGGGCGTA CGTCGGTTTA GATTATCCGT TTTACGTCGG CGTCGCAACC
GCGACGTCAC ATTTGTTTTG GCAAATCGCG ACGGTGGATT TGGACGATCG AGAAGACTGT
GCGGCGAAGT TTCGCAGCAA CTCGACGTAC GGCGCACTGG TGTTCGCGGG GATAGTCGCA
GGAAAGGTGT TTTGA
 
Protein sequence
MLAAARRRAS AARASTVEAC ARALASGSAT RARASACANA ARGTWAEAST STPPRAAHAS 
SFVARRPRTG DGEYFRSFAA SASTSHSSRV KADEEASSAS SAATPAPEAE NTWVDRVVPS
SLVPYAKLVR LDRPIGTALL AWPCFWSIAL AADAGALPDA RLLGLFGVGA LLLRGAGCTV
NDLWDRDIDN KVSRTRNRPI ASGAVSVPKA ILFLGAQLAL GLGVLVQLND YSKILGASSL
ALVAAYPAMK RITNYPQAFL GLTFNWGALL GWAAVHGSCD WGAVLPLYAS GVAWTLVYDT
IYAHQDKHDD AKVGIKSTAL HFGKDTKKYL GAFALAGTSA LCASGAYVGL DYPFYVGVAT
ATSHLFWQIA TVDLDDREDC AAKFRSNSTY GALVFAGIVA GKVF