Gene OSTLU_43197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_43197 
Symbol 
ID5005344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009368 
Strand
Start bp179023 
End bp179670 
Gene Length648 bp 
Protein Length215 aa 
Translation table 
GC content73% 
IMG OID640420765 
Productpredicted protein 
Protein accessionXP_001421411 
Protein GI145354265 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0707] UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.024705 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0274822 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACCGC GTTCGCTCCT CGCGCTCCTC GCGCTCGCCA ACGTCGCGCT GTGGATCGCG 
CGCGCCGCGA CGCGCGCGTT AGACAAGTCG GCGCTCCGCG GCCGGCGCGC GCGGGCGCTC
GTCGTGCTCG GCAGCGGCGG ACACACGGCG GAGATGCTGC GCATCCTGCG CGACGCGCGA
ACGCTCGACC GACTGGACGT CGCGGCGTAC GTCGTCGCGA GCACGGACGC GCGGAGCGCC
GACAGAGCGC TCACGTTCGA GCGCTCGCGA CGCGGCGCTC GCGGCGAGGC GCGCGTGCTG
ACGATCGGAC GCGCGCGAGA GGTGGGCCAG CGATGGACGA CGAGCGCGGC GACGACGGCG
CGCGCGTGCG CGGCGGCGAT CGCGATCGTC GCGCGCGTGA AACCGGACGT GGTGATTTGT
AACGGACCGG GGACGTGCGT GCCGATCGTG CTGGCGGCGA TGGCGCGACG CGCGCTGGGG
TGGCGAACGC CGGCGACGGT GTTCGTGGAG AGCGCGTGTC GCGCGCGAAC GCTCAGCCTG
ACGGGGAAGA TTTTTTATCA TCTGAGGTGC GTCGATCGGG TGTGCGTGAT GTGGGAGCGC
GCGCACGCGG CGTATCCTCG CTCGACGTTC GTCGGGCGCG CGATGTAG
 
Protein sequence
MPPRSLLALL ALANVALWIA RAATRALDKS ALRGRRARAL VVLGSGGHTA EMLRILRDAR 
TLDRLDVAAY VVASTDARSA DRALTFERSR RGARGEARVL TIGRAREVGQ RWTTSAATTA
RACAAAIAIV ARVKPDVVIC NGPGTCVPIV LAAMARRALG WRTPATVFVE SACRARTLSL
TGKIFYHLRC VDRVCVMWER AHAAYPRSTF VGRAM