Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_42040 |
Symbol | |
ID | 5006334 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009371 |
Strand | + |
Start bp | 362331 |
End bp | 363689 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | |
GC content | 57% |
IMG OID | 640421755 |
Product | predicted protein |
Protein accession | XP_001422173 |
Protein GI | 145355876 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5044] RAB proteins geranylgeranyltransferase component A (RAB escort protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 75 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCAAG AGTACGACGC CATCATCTTG GGCACCGGCC TGAAGGAGTG CCTCGTCGCC GGCTTGCTCG CGAGCGTCGA AGGCTACAAG ATCCTGCACG TGGACCGAAA CGATTACTAC GGTGGGGAAA GCGCGAGTTT AAATTTGACG CAGCTGCACG AGAAGTTCGC ACCCGAGAAG GCGCAAGACA AAGCGGCGCT GACGGCCAAG TACGGACGAT GGCAAGACTA CAACATCGAT TTGGTCCCCA AATTCATGAT GGGAAACGGA TTGCTCGTGC GCGTGCTCGT CCGCACCGGC GTGCACAACT ACTTGCAATT TCGCGCCGCC GAAGGGTCGT ACGTGCAAGG AAAGGGTGGA AAGATTCATA AAGTGCCGTC GAACGATAAG GAAGCGCTGC GGAGCTCGCT GATGGGAATG TTTGAAAAGT TGCGAGCGCG CAGCTTTTTC ATCTTTGTGC AAAATTTCGT CGAGACGGAC CCGAGCACGC ACGGCGGATA CAACTTACAG CGCATGCCGG CGAGAGATTT GTACGAAAAG TTTGGTTTAG CCGCGGAAAC GGTGGAGTTC ATCGGTCACG CGTTGGCGTT GAAGACGAAC GAACGCTATT TGGACGAGCC CGCCGTCGAC CTCGTCAAGG CGGTGAGACT TTACTCCGAT TCTATGGCGC GATTCGACAC CGGTTCGCCG TACATTTATC CGCTTTACGG CCTAGGAGAA CTCCCGCAAG GATTTGCACG TCTCAGTGCG GTGCACGGGG GGACGTACAT GCTGGCGAAA TCCGACGTCG AGGTCGTGTA CGACGAGGAA ACCGGTCGCG CGTGCGGCGC GAAATCCGAG GGCGAAACCG CCAAAGCAAA GTTCGTCGTC GGTGACGCGA GCTACTTTCC AGGGAAGACT CAAAAGGTCG GTCAAGTCGT TCGAGCGTTG TGCTTGCTGA GCCATCCGAT TCCGAATGTG AACGACGCGG AGAGCGTACA AATTATCATT CCAGCGGCGC AGTGCGGCCG CCGCCACGAC GTCTACGTGC TCGGCACGAG CTCGGCGCAC AACGTTTGCG CAAAGGGACG CTACTTCGCG TCGGTGAGTA CGACTGTTGA AACGAACGAT CCTCATCGCG AACTCGAGGC TGGTCTTCGC ATGCTCGGTC CGATCGACGA GCTCTTTTAC AACGTCACCG ACGTGCACGC GCCTCTCGCG GATGGAACTG CCGACGGCGC GTTCATCTCC ACGGGTTACG ATGCCACGAC GCACTTCGAG ACGACGGTTC GGGATGTCGT CGATATTTAT CGACGAATCA CGGGCAAAGA ATTAGACTTG TCCAAGGACG ACGCGGCCGC GGCGAACACT TCGGGCTGA
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Protein sequence | MDQEYDAIIL GTGLKECLVA GLLASVEGYK ILHVDRNDYY GGESASLNLT QLHEKFAPEK AQDKAALTAK YGRWQDYNID LVPKFMMGNG LLVRVLVRTG VHNYLQFRAA EGSYVQGKGG KIHKVPSNDK EALRSSLMGM FEKLRARSFF IFVQNFVETD PSTHGGYNLQ RMPARDLYEK FGLAAETVEF IGHALALKTN ERYLDEPAVD LVKAVRLYSD SMARFDTGSP YIYPLYGLGE LPQGFARLSA VHGGTYMLAK SDVEVVYDEE TGRACGAKSE GETAKAKFVV GDASYFPGKT QKVGQVVRAL CLLSHPIPNV NDAESVQIII PAAQCGRRHD VYVLGTSSAH NVCAKGRYFA SVSTTVETND PHRELEAGLR MLGPIDELFY NVTDVHAPLA DGTADGAFIS TGYDATTHFE TTVRDVVDIY RRITGKELDL SKDDAAAANT SG
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