Gene OSTLU_40884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_40884 
Symbol 
ID5002401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009360 
Strand
Start bp340974 
End bp341840 
Gene Length867 bp 
Protein Length288 aa 
Translation table 
GC content50% 
IMG OID640417822 
Productpredicted protein 
Protein accessionXP_001418219 
Protein GI145347535 
COG category[S] Function unknown 
COG ID[COG1723] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.00671341 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.871752 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCCCG TGCGCGCGTA CTACGTAGGG AGTACAATCG ACGTGCGTGC GTTGGCGAAG 
CAAATGCCGG CGTATCCGAA AGAGTTTAAT CGCGAAGGAG TGATCATACG AATGTCGCCG
AAGAAAGTGG CAGAGTTACC GAGCATCGAT GGCGACGCCC CGATACCGCC GGAGATGTTG
AGTCGGTATT TGGTGGTGTT TAAGTTCGGG AGCGTGGTGT TTTACAACAT GGGGCACAAG
GAGCGGGAGG AGTGTTTAAA GCTCGCGAGA TCGTTCACGT CGACGCCTCT GGCGGTGCCA
ATGACGGATG ATTATCGAGT CGTTGTCAGA CCGACGCTCA CGGACTGGGC GAGCCTAGAA
AGCGATCATA TTGTTCTGAA GAGGATGGAT ATAAACAACA TTAGTGTCAT CTCGAGCGTG
CTGGCACAAA CTGTCGCGCT GGAACACTAC GAGCAAAAAG TGGACGGGAT GGTTGAGATT
TTTAGTAAAT TGAACAAGAG CACGGAGTTG ACAGGGGACC TGAACATTAG CAAGAAGCGC
TTGTTCTCGT TAGTCGCCGA GAACAACAAC ACGCTGACGG AGTTAATTAC GAAACTCGGT
TTGTTGGGAC GCTCCGACAC CGCTTGGCAA TACGCGCAGT ATAATATTGT CTGGGAAGGC
TTGCGTCAGG ATTTCGAGCT CGAAGATAGG TTTCAAGATT TGGATTACAA GCTCAATCTC
ATTCAAACCC AAGTGAAATT CTATTTGGAG ATTCTACAGA ATCGAAAGAG CGACGCGCTT
GAGTGGATCA TCATCGTACT CATTTCACTC GAGATTTGCG TCTCGCTGTA CGACATGGCG
GACAAAATTC CCCCAATTCC ATGGTAG
 
Protein sequence
MLPVRAYYVG STIDVRALAK QMPAYPKEFN REGVIIRMSP KKVAELPSID GDAPIPPEML 
SRYLVVFKFG SVVFYNMGHK EREECLKLAR SFTSTPLAVP MTDDYRVVVR PTLTDWASLE
SDHIVLKRMD INNISVISSV LAQTVALEHY EQKVDGMVEI FSKLNKSTEL TGDLNISKKR
LFSLVAENNN TLTELITKLG LLGRSDTAWQ YAQYNIVWEG LRQDFELEDR FQDLDYKLNL
IQTQVKFYLE ILQNRKSDAL EWIIIVLISL EICVSLYDMA DKIPPIPW