Gene OSTLU_40815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_40815 
Symbol 
ID5002190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009360 
Strand
Start bp707832 
End bp708377 
Gene Length546 bp 
Protein Length182 aa 
Translation table 
GC content68% 
IMG OID640417611 
Productpredicted protein 
Protein accessionXP_001418554 
Protein GI145348221 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0533421 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCG CGGGCCTGCG CGCGCTTCCG ATCGCGGTGT CGCGCGACGC GAGCGTGACG 
ATCGATTTCT GGGCACCGAC GAGCGCGACG AACGTGCGCG CGCACTTTTG CACGCACGCG
CACGCGGATC ACGTCGTCGG ATTGGGACGC CGAGGATGGT CGCCGGCGCG CGCGGGGGGG
AAGATCTTCT GCACGGAGAT CACGCGAGAG GTGCTGGTGA GGCGATGGCC GACGCTGGGG
CGACACGCGC GCGCGCTCGA AGTCGGCGAA CCGACGGCGA TACGATTGAC GGCGAACACG
ACGGTCACGG TGACGCTGAT CGACGCGGGA CACTGCCCGG GGAGCGCGAT GGTGCTGATC
GATGGACCGC GCGGACGCGT GCTGCACACG GGAGATTTTA GACGGGAAGA TTTCGGGACG
AGGGCGGCGC TGCCGAGATG CGTGACGCGG GCGCCGATCG ACGCGTTGTA CCTGGATAAC
ACGTACGCGC ATCCGACGTG CGTGTTTCCC GATCGCGGAA GCGCGACGGC GGAGGTGATC
GCGCTG
 
Protein sequence
MATAGLRALP IAVSRDASVT IDFWAPTSAT NVRAHFCTHA HADHVVGLGR RGWSPARAGG 
KIFCTEITRE VLVRRWPTLG RHARALEVGE PTAIRLTANT TVTVTLIDAG HCPGSAMVLI
DGPRGRVLHT GDFRREDFGT RAALPRCVTR APIDALYLDN TYAHPTCVFP DRGSATAEVI
AL