Gene OSTLU_40690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_40690 
SymbolPRPL4 
ID5005789 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009369 
Strand
Start bp21082 
End bp22151 
Gene Length1070 bp 
Protein Length251 aa 
Translation table 
GC content65% 
IMG OID640421210 
ProductPlastid ribosomal protein L4 large ribosomal subunit 
Protein accessionXP_001421683 
Protein GI145354841 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0088] Ribosomal protein L4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTCGA GCGCGGCGCT CCAAGGCACC ACCGCGATCA CGTCTCCGCG ACCGATCGCC 
GGTAAGCGCG GCGCCAACGC GCGCGTCGCC CCGGTCGTCC CGCGCGCGGC GGCGATCGAT
GCGGTCACCT TTGACGGCGC GAAATCGTCC GCCGCCACGC TCGAGCTCAA GACCGCGCGC
GCGGAGGTGG CGAGAGGGTT GGTGCATAAA TACGTCGTCA TGGTTCGACA GAATGCTCGC
AGGGTACGTG CGCGCGCGAC GCGACACGCG CGAATGAAAC ATCACCGCGA GGGCGCGCAT
CCCGGGAAAC CCTGAGGCGC GGGCGCGGGA CGCGGGACGC GGGACGCGAC GCGCGACGCG
CGCGGCGACG ACGAGACGAA CGCCGGTGAA TGCGACGATT TATCGTTCGC GGCGTCGTCG
CGATCGTCGT CGCGAACGTC GTCGCGATCG TCGTCGCCAC CCCACGCCAT CGCTCGAGGG
CAAACAAACC CTATTCAGCG GGCGTGGTTA TCCACGATGA CGACCGGCGA GACTGACGGA
CTTTCTTACG AACGCAGGGC ACGGCGAGCA CGCTCACGAA GAGCGAAGTG CGAGGGGGCG
GGAGAAAGCC GTTCAAGCAA AAGGGTACGG GTAACGCGCG CGCCGGTTCG AGCCGAACGC
CGCTCAAGCC GGGCGGAGGC GTGTCGTTCG GGCCGAAGCC GCGCGACTGG TCGATTAAGA
TGAACAAGAA GGAGCGTCGA TTGGCGATGG CGACCGCGTT GCAATCGGCG GCGAGCGCGA
TGATTGTCGT TGATGATATC TCGGGTAACA TCTCCGCCCC GGGCACGAAC GCGTTCAACA
AGTCTTTGAT GGCGTGGGGC GTCGGCGCCT CGGAGAAGGC GTACGTCATC ACCAAGGACG
CCAACGAAAA CGTCGCGAAG AGCGCGCGGA ACATTGAGCG CGTCGTGCAG ACGGACGTCT
CGCACTTGAA CGTGTACGAC ATCTTGAACG CGGATAAGGT CATCGTGGAA GCGTCGGCGT
TGGCGCACAT TTCCTCCTTT TTCGGCGAGA ACGGCGCCGC GTGGGAATAG
 
Protein sequence
MRSSAALQGT TAITSPRPIA GKRGANARVA PVVPRAAAID AVTFDGAKSS AATLELKTAR 
AEVARGLVHK YVVMVRQNAR RGTASTLTKS EVRGGGRKPF KQKGTGNARA GSSRTPLKPG
GGVSFGPKPR DWSIKMNKKE RRLAMATALQ SAASAMIVVD DISGNISAPG TNAFNKSLMA
WGVGASEKAY VITKDANENV AKSARNIERV VQTDVSHLNV YDILNADKVI VEASALAHIS
SFFGENGAAW E