| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_40550 |
|---|
| Symbol | |
|---|
| ID | 5005665 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009369 |
|---|
| Strand | - |
|---|
| Start bp | 1418 |
|---|
| End bp | 4405 |
|---|
| Gene Length | 2988 bp |
|---|
| Protein Length | 950 aa |
|---|
| Translation table | |
|---|
| GC content | 54% |
|---|
| IMG OID | 640421086 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001421676 |
|---|
| Protein GI | 145354827 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCAAA ACCGACGACT GACTGGGCAT ATATTATTTC ATCGACGGGC GCAGAGAGGA
CGCGTACACC CGGGAGATAT CGCCGAAGCC GCGTCGCTGG CGAGCATCGA TTTACCACCG
GCCAAGTATC CTTTATTTGA CGCCATCGGC GACGATTTCG TGGAGACTGG AAAACTGAGC
AAGCTCCAAC TGGAGGGTGT CATGTTCGCG TGTCAAAAGC ACTGCGAATT CGCGCCGGAT
GGCAAGCGTT CGGGTTTCAT GATTGGCGAC GGTGCGGGGG TGGGCAAGGG ACGACAAATT
AGTGGAATTA TTATCGATAA TTTCGTGCGA GGCCGTCGGA AAGCGGTTTG GATATCGAGC
TCGGGCGATT TACACCGAGA CGCCGAGCGC GACTTGAGCG ATTTGGGAAG CACTATTAAG
GTTATTAATT CGTGCCCAGA GCTCGATCGC GAAACTCGCG CGTTCGGGTT ATCGAAAGAG
TATCAAGAGG GCGTGTTGTT TACCACCTAC AGCACGTTAG TGAGCAAGAC GCAGAAGAAG
AGTCGTCTCG ATCAAATCGT AAATTGGTTC GGCGGCGAAG ACGCCGAGGG CGTCGTGATT
TTTGACGAGT GCCACAAGGC AAAGAACTTT AGCGCGTCTT CTGATTCGGG TAGTAAAGTT
GCGGCGGCTG TGATTGCGTT TCAGGAACGC TGTCCTCGCG CGCGCGTTGT GTACGCGAGC
GCCACAGGTA TCTCTGAAGT TGGGCACATG ACCTACTTGG CCAGACTCGG TTTCTGGGGC
AAAGGGACGC CATTTAAATC CGCGGATACG TTCATTGAGA GCATGAAGTC TCGCGGTGTA
GGATTTTTAG AAATGCTCGC CATGGAAATG AAGGCAAGTG GGAAGTATGT TAGTCGAGGT
TTATCTTTTA GGCAGGCAGA GTTTGAGCAG TACACGATCG CGCTCAGCAA AGAGCAGCGT
CAAATGTACG ATGACGCGTG CGACTTGATG TCGCTCATCC GTAATGCGTG TATCGAAGCT
GTGCGTCGAA CTGGTTCCGA TGGAAAAGGC GTTTGGAGTG CGTATTGGAG CGTCCATCAA
AGATTCTTCA AGCTCTTGTG CATCAGCATG AAAGTTCCGG CGGTCATCGC CAAGGCGAAC
GAGGCGCTCG CGCGAGAGCA ATGCGTCGTC ATCGGGTTGC AAACGACAGG TGAGTCTCAA
GATGCGTCAG CCAACTTGAC TTTTGGTGAA GACGTCACGG AGTTCGGGTT CCTGAGTACG
ACGCGCGAAA TGCTCGTCAA TTTCTTGAAC GTGCACTTTC CGACTGAAAT CCACGGCGCT
TCAGACGGAG CGGCGGCGGA AAAGTCGGCG CCTTCCGATT GGTCGAGCGA TTGGAGGCGT
GCAGGCGGCG CGGAGGTAGA GAGCGAAGGC TACACTGGTC GTTTTCACAC GAATGCCCCA
GCCAAGGTCG ACGAAGAGCT CGTGGACGCT AAGGAAGAGT TGATCAATAA AGTCATCAAG
TTGAGGTTAC CGCCGAACTT TCTCGATGCT CTGATTGATG GGCTCGGAGG GCCGACAGAA
GTTGCCGAAC TCACGGGAAG AAGCGGTCGC ATCGTGCGTC GAGGCGATAG GCTCATGTAC
GAATCGCGTG GCACGACGGC GTCTAGAAAA GGAACGAGCA TCAGCGGCGA CGGTGATGTG
CTCGGAGTGA ACATCGCCGA GAAGAACGCG TTTATGAATG GTGACAAACG TGTGGCCATA
ATTTCGGACG CGGCTAGTAC CGGGATTTCA TTGCACGCGT CGAAAGGCGC GAAAAATGTC
CGCCGCCGCG TGCACGTCAC GATAGAACTT CCATGGAGTG CGGACAAGGC GATTCAGCAG
CTCGGTCGCA CGCATCGATC CAATCAGATT ACGGGTCCAG TGTACGTGAT GTGCTCGACG
AATATCGGAG GCGAAAGACG CTTCGTCGCC GCCGTCGCAC GACGCTTGCA AAGTCTCGGG
GCGTTGACGA GAGGTGATCG ACGTGCGGCG ACTGGCATTG ATTTATCCGA TGGCAATCTC
GACTCGTCAC TCGGGCGACA CGCGTTGAAG AAGCTCTACG AGGCGCTCGT CGCGCTCGAT
GCGAATCTCC CGTCGGGCGT CACGCTCGAG GGCATCATGT CGCATGTGAA CGACGACGAT
CTCGAGGGGA AACCCATCTC GAGCTGGCAG GATTTGAAGC TTGAACTTCG TTCAGCGTTA
TTGGAGCTCG GAGTGCAGGT TGGACTGCGA AATGACGGCT TTTCGGTCGA AGAAGCGACG
CTGCTGCAGG AAATTGGATA CGGCAACAAA GATCTCGGCG ACGTGCGCAA GTTTCTCAAT
CGCCTACTTG GACTTCCGGT GCGAACGCAA AATATCATGT TTGCATACTT TGCTGAAACC
TTGGATTGCG AAATCAAATT AGCAAAGGCT GAGGGGAAGT ACACGGAGGG CGTGAGCGAT
CTCGGTGGTT CTTCCATTCG CATCGAACCA GAGTCGAAGA CGATTCTTAA GGATCCGTAC
CACGGACAAA AACTCGTGTC GACCAAGGTT TTCATAGATC GCGGTATTTC GTTTGAGCGT
GCGCTGGATA TTTTGGAAAA GAGCAAGAAT CACGATCGAG ACGGCTTCTA CAAGATGAAG
CGCGAGATGT ATGGGCGCGC GCAAGTCGTT CTGGCCATCA CCAAGCCAGG TTCGCGAAAC
TTGTTCATGC TGTGGCGTCC GAACACCGGC GCAAGTCTTT TCGAGATGGA GTACGACGAA
TTGCGCGGCA AATACATGAT GTGCACGCCC GACGTGGCGA AACAACCGTG GGATCTTGTG
CACGAATTGA CCGAGAAGCA TTGCATGCAC GGCGTGAATT GTCACGTTCG ACAAACCATG
GGCGCTTGTA CCGCGGGCAA ACGCACGGTT GACTGCACCG TGATCAGCGG CGCCGTCGTG
CCTTGCTGGG GAGAGCTCGA ACGAACTTTG GATAGAAACG CGCACAAG
|
|---|
| Protein sequence | MIQNRRLTGH ILFHRRAQRG RVHPGDIAEA ASLASIDLPP AKYPLFDAIG DDFVETGKLS
KLQLEGVMFA CQKHCEFAPD GKRSGFMIGD GAGVGKGRQI SGIIIDNFVR GRRKAVWISS
SGDLHRDAER DLSDLGSTIK VINSCPELDR ETRAFGLSKE YQEGVLFTTY STLVSKTQKK
SRLDQIVNWF GGEDAEGVVI FDECHKAKNF SASSDSGSKV AAAVIAFQER CPRARVVYAS
ATGISEVGHM TYLARLGFWG KGTPFKSADT FIESMKSRGV GFLEMLAMEM KASGKYVSRG
LSFRQAEFEQ YTIALSKEQR QMYDDACDLM SLIRNACIEA VRRTGSDGKG VWSAYWSVHQ
RFFKLLCISM KVPAVIAKAN EALAREQCVV IGLQTTGESQ DASANLTFGE DVTEFGFLST
TREMLVNFLN VHFPTEIHGA SDGAAAEKSA PSDWSSDWRR AGGAEVESEG YTGRFHTNAP
AKVDEELVDA KEELINKVIK LRLPPNFLDA LIDGLGGPTE VAELTGRSGR IVRRGDRLMY
ESRGTTASRK GTSISGDGDV LGVNIAEKNA FMNGDKRVAI ISDAASTGIS LHASKGAKNV
RRRVHVTIEL PWSADKAIQQ LGRTHRSNQI TGPVYVMCST NIGGERRFVA AVARRLQSLG
ALTRGDRRAA TGIDLSDGNL DSSLGRHALK KLYEALLGVQ VGLRNDGFSV EEATLLQEIG
YGNKDLGDVR KFLNRLLGLP VRTQNIMFAY FAETLDCEIK LAKAEGKYTE GVSDLGGSSI
RIEPESKTIL KDPYHGQKLV STKVFIDRGI SFERALDILE KSKNHDRDGF YKMKREMYGR
AQVVLAITKP GSRNLFMLWR PNTGASLFEM EYDELRGKYM MCTPDVAKQP WDLVHELTEK
HCMHGVNCHV RQTMGACTAG KRTVDCTVIS GAVVPCWGEL ERTLDRNAHK
|
|---|
| |