| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_39658 |
|---|
| Symbol | |
|---|
| ID | 4999384 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009355 |
|---|
| Strand | + |
|---|
| Start bp | 275038 |
|---|
| End bp | 276606 |
|---|
| Gene Length | 1569 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | |
|---|
| GC content | 58% |
|---|
| IMG OID | 640414805 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001415439 |
|---|
| Protein GI | 145340661 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG5533] Ubiquitin C-terminal hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.334345 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAGCG CGGAAACGCT GGACGTGGGG GCGGAGATGC GGTGCGTGAT GCGGACGCTG
ATGGATGGAG AGTACGAGGC GTTTCCGCCG CACGATTTGT TGCGAAGCGT GTGGAGGCTC
GTGCCGTCGT TCGCGGGGAA CGAACAGCAG GACGCGCACG AGTTCATGCG GTTCTTGTTG
GATAGGTTGA GAAAGGAGTT GAGTAGTGGG AAACACGCGG TGAAAATGCG AGGGACGCTG
ACGCCGCGGC GGAAGGAACA CTCGCCGTGC GAAAACGGCA TTCCGAATCC TCCAACGCGA
GCGAGAAGCG TGAGAAGCCG CAGCGGAAGA TCGAGCCCGA GCCCGAGCTT TTTGAGAAAC
GACGACGACG ACGACGACGA CGAGACGAAA AGTAGCGGCG CTGCACGCGG CTCGTCGCCG
GTGAATGGGC TGTTGTCGAA CGAAGATAGG CGAGTGGACG ACGGCGACGA AGACGGAGGA
TACATCATCA TGTCTCGTTG GGGGCCGAAG AGACACGACA AGGGTTGTAT TTGCCGTCCT
TGCAAGGCGC AGGCGAAGAA GGAAGCGCAA GAAGGGGTGC GCTGCGAAAA GTCCAAGACT
ACCACCGCCG ATGCGAGCAC GCATTTGAGT TCGCCTTCGA GCACGTTTGC GTCGCCGTCG
CGGCTGTCGC GCGGGGTCAC GGCGAGCGAG GTGAAGAGGC AACTCGAGGA GTCGCTTAAG
GGATCTCAAA CGAACGGATT GAAGGGTGGA TTGTCACCCA CGTCGCCGAA GACACCACAG
GGGAAATGTG AACAAGATGA CGGCGTGACG GGTGATAAAA TCATGGAAAT CTTCGGCGGC
GTTGCGGTGA CGACGGTGAC GTGCATGAAG TGCGAGCGAT CAAGCGAACG TCGAGAACCA
TTCATGGATC TTTCGCTTCC CATCCCTCCT GTCGTCGGGA AAAACGGCTC CGTGCCGTCG
ACCCCGGTTT CACCTTCGGT GGAGATCGAA GAAGGCGAAG GTCCTAACGG AGAGGCCACC
CTGCAGCAAT GTCTCGCGGC GTTTGTGCGC AACGAAACCC TCAGCGGACA CGGGCGATAC
TTTTGCGACG GATGCGGTAA AGTTCAGAGT GCGACGAAAT CTACGCGGAT CGCCAAGCTC
CCGCCTGTTC TGTGCTTGCA CTTGAAACGT TTCACGTGGA AAGGTCACGC GATGCGCACC
AAGCTCACGC ACGACGTGGA CTTCCCTTTG GATGATTTAG ACTTAGCTCC TTACTGCGAG
ACCAACGGCG AAGCGGTGCA AAAACCTGAA AAGGTGCCGG CTTCGACGGG AAAGTCTCGT
CGCACACCGA GGAAGAGCGC CATCCCCCCT GCGCAGGTTA TGCGCAGCGA TAAGATGTAT
GATCTCGTGG CTGTCGTCAC GCATCACGGT TTGAACGCCG GTAGTGGGCA CTACACCGCT
TGCGCGCGAG AGTTCACCGC TGAAGGAAAC AGCGACTGGC AGCACTTCAA CGACGATGAT
GTCAACTCAC TCACCGCGGA AGAAGTTCGA ACGGGTCAGG GATATATCTT TTTATACGCG
CGTAAGTAA
|
|---|
| Protein sequence | MASAETLDVG AEMRCVMRTL MDGEYEAFPP HDLLRSVWRL VPSFAGNEQQ DAHEFMRFLL
DRLRKELSSG KHAGSQTNGL KGGLSPTSPK TPQGKCEQDD GVTGDKIMEI FGGVAVTTVT
CMKCERSSER REPFMDLSLP IPPVVGKNGS IEEGEGPNGE ATLQQCLAAF VRNETLSGHG
RYFCDGCGKV QSATKSTRIA KLPPVLCLHL KRFTWKGHAM RTKLTHDVDF PLDDLDLAPY
CETNGEAMYD LVAVVTHHGL NAGSGHYTAC AREFTAEGNS DWQHFNDDDV NSLTAEEVRT
GQGYIFLYAR K
|
|---|
| |