| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_39472 |
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| Symbol | |
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| ID | 5004914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009366 |
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| Strand | - |
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| Start bp | 296605 |
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| End bp | 298542 |
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| Gene Length | 1938 bp |
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| Protein Length | 645 aa |
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| Translation table | |
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| GC content | 61% |
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| IMG OID | 640420335 |
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| Product | predicted protein |
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| Protein accession | XP_001420815 |
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| Protein GI | 145352989 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.000845209 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.555705 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCGCG CGACCGCGCG GATAACGAGC GCGACGAGGA AAGACGCGCG CGGGCGACGA
ACGGTGACGC GCGCGAGCGC GCTGGACGAC GCGAGCGAAA CGCACGACGT CGTGGTGATC
GGAAGCGGGA TCGGTGGGTT GTCGTGCGCC GCGCTGTTGG CGAAGTACGG ATACGAGGTG
AAGGTGTTTG AGAGTCACTA TCTCGCGGGC GGGTGCTGTC ACATGTTCGA TCATCGAGCG
CCGGATGGGG CGTTGTATAA GTTTGAGGTC GGACCGAGCA TTTGGGAGGG GTTGGATCGA
CCGACGGGGA ACCCGCTGAG GATGGTGCTG GACGCGCTCG GGGAGACGGT GCCGGTGAAG
ACGTACGACG GGATTTCGAT GTGGACGCCG GAGGGGCACT GGAGGTTTCA AACCGGGGAC
GATGACGCCC CGGGTGGGTT CTGCGATTTG TTGCGCGAGA AGGCGACGGA TCCGGAGTTG
GCGATCAAGG AGTGGAAGGC GCTGAAGGGG CGGTTGGAAC CGTTGTACGA CGCGCTGGAC
GCGTGTCCGC TCACGGCGCT TCGCCAGGAC GCCGGGTTGT TGGTGTCCAC GGTGATTGCG
ATTCCGTTTT ACCTCACCCA TCCGAACGTG ATGTTGGATA TTCCTTATAT TTTGGACTCA
TTTCATAAGT TATCGCGACA GTACGTCACC GAACCGTTCT TGAAGCAGTG GATCGACATG
CTGGCGTTTT TCAGCGGGTT CCCGGCGGAG GGCACGATGG GGGCGACAAT GATTTATAGT
ATTCCAGGAT TCCATCGTCC CGGGGCGTCG TTGTGCGCGC CCGAGGGCGG TACGCAGGCA
GTTGTGGATA AGCTTCAATA CTGCTTGGAA AAGTATGGTG GTGAATTGCA GCTCAAGTCG
CACGTGGAGG AAATCATCGT CGAAGACGGA GAAGCCAAGG GTGTGCGTCT TCGAAACGGT
AAAGTCATCA AGGCGAACGT CGCGGTCGTT TCGAACGCGA CTATCTGGGA CACTGTGCCG
ATGTTGCCCC AGACAGACGA ATTAATAGCA CAAGGTCTCG ACAGGGCGGT GGAGTGGAAG
GACGAAATGT CGGAAATCCC CGCCCTCGGA AGCATCATGC ACTTGTTCCT CGGCATCGAC
GCCACGGGCT TACCCGATCT GGATCCGTCG CATCTGTGCG TTTTGGACTG GGACCGACCT
CTCGGTGATC CCCAAAACGT CATCACAATC TTCATTCCCA CCGTGCTCGA TCCTGAAGTC
GCACCCGAAG GTAAGCACAT CATTCACGTG TACACAGCCG GAAGCGAACC GTACGACATT
TGGGAAGGCA AGGATCGAGG GAGTCAAGAG TACAAGGATT TCAAGCGCGA ACGCGCTGAA
ATCCTGTGGA ATGCCATCGA ACGCATCATA CCGGACATTC GTAGCCGCGT CGAAGTTGAA
GTGTACGCGT CTCCGCAGAC GCATCAACGG TTCCTCCGAC GGCACCGCGG CACGTACGGC
CCGGCGCTCC CAGCCGGCGG CAGCCTCTTC GGCTTCTTAC CTCTGCCCGA AGTTCCGCAA
CCGGGCGTAT TATCCCCTAT CCCCAAGTTA TTACGTTGCG GCGACTCCGT GTTCCCGGGC
GTCGGCGTTC CCGCGGTCGC CGCCTCTGGC GCCATCGCCG CGAGCACGCT CGCCCCGCTC
CCCAAGCACC TCGGTCTCAT GTGGGACGTT TCCCAAACTC AAAACACCTT TTGGCGCGAG
TGCGGAGGCA AGGAAAAGTG GCTCGCGTCC GCGCCCGCGC CTTTCCGACC CGCCGCGGGC
GGCGGCGCCG AATTCATGAC CCCAGACCAA TACTACAAGC CCAAGCCCGA GGCCGAAAAG
TCCTTCGCCG AAATCGGCAA GCGCGGCGTC GTCGCTCAGT CCCGCGAGCG CGGCGTTGCG
GATCGCGAGT CGCGGTGA
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| Protein sequence | MQRATARITS ATRKDARGRR TVTRASALDD ASETHDVVVI GSGIGGLSCA ALLAKYGYEV
KVFESHYLAG GCCHMFDHRA PDGALYKFEV GPSIWEGLDR PTGNPLRMVL DALGETVPVK
TYDGISMWTP EGHWRFQTGD DDAPGGFCDL LREKATDPEL AIKEWKALKG RLEPLYDALD
ACPLTALRQD AGLLVSTVIA IPFYLTHPNV MLDIPYILDS FHKLSRQYVT EPFLKQWIDM
LAFFSGFPAE GTMGATMIYS IPGFHRPGAS LCAPEGGTQA VVDKLQYCLE KYGGELQLKS
HVEEIIVEDG EAKGVRLRNG KVIKANVAVV SNATIWDTVP MLPQTDELIA QGLDRAVEWK
DEMSEIPALG SIMHLFLGID ATGLPDLDPS HLCVLDWDRP LGDPQNVITI FIPTVLDPEV
APEGKHIIHV YTAGSEPYDI WEGKDRGSQE YKDFKRERAE ILWNAIERII PDIRSRVEVE
VYASPQTHQR FLRRHRGTYG PALPAGGSLF GFLPLPEVPQ PGVLSPIPKL LRCGDSVFPG
VGVPAVAASG AIAASTLAPL PKHLGLMWDV SQTQNTFWRE CGGKEKWLAS APAPFRPAAG
GGAEFMTPDQ YYKPKPEAEK SFAEIGKRGV VAQSRERGVA DRESR
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