Gene OSTLU_38932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_38932 
Symbol 
ID5002138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009359 
Strand
Start bp571097 
End bp571855 
Gene Length759 bp 
Protein Length253 aa 
Translation table 
GC content52% 
IMG OID640417559 
ProductABC(ATP-binding) family transporter 
Protein accessionXP_001418051 
Protein GI145347176 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0950167 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCGT TCGTCTTTGT CAGATTTAGA TCTCAGCAGC GTTGGAAACT CCGTGAAATC 
TTTGCGCACA ACGTAGTGCC ACGTTATAAG TACCCTACTA CGGTAGAGCT GAAAAACGTG
ACGTGCTCCG TGGATGATGA TCGCATCATA ATTGATGACG TAAGTGCGAC GTTTCACCCA
GGGGAAATCG TGGGCGTTCT GGGACCGAGC GGCTGTGGAA AGACGACGCT CATGAACGCG
CTTGTTCACG GAAACTTTCT CAAAAGTGGA ACGATATTGG TAAATGGAGA AGAGTTGGAC
GAAAAGCGAC ACAACCTCGC GTTTGTTGCG CAGCACACGC CTATGATCGC GCAGTTAAGC
GTTTACGAAA CGTGCTGGGT CGCAGCAAGC CTACGACTAC CCTGGTTCTT GCACGCGAAC
GAGCTGCATG AGCGCACTCA TGATGTCATA AATTCTCTCG GATTAACACA CGTCTCCAAC
TCTCGCGTTG GCGGGACGCT GTCACAGAAA CAAACATTGA GTGGAGGCGA ATTGCGCAGG
GTTGCGATCG CGCAGGAGCT GGTTGTGGAT CCAACAACGA TTATCTTAGA TGAGCCGACT
TCTGGACTAG ATGCACACAC GTCCTGGCGC GTATTCACAC TCCTGCGTGA TCTCGCATCT
CACCAAGAAA AGGTCGTCGT CGCAACCGTG CATCAACCGT CGAGGCGTGT CCTGGATAAT
TTTCACAAAA TTCTTGTTCT CACGCAGAAC GGCCGCTTG
 
Protein sequence
MAAFVFVRFR SQQRWKLREI FAHNVVPRYK YPTTVELKNV TCSVDDDRII IDDVSATFHP 
GEIVGVLGPS GCGKTTLMNA LVHGNFLKSG TILVNGEELD EKRHNLAFVA QHTPMIAQLS
VYETCWVAAS LRLPWFLHAN ELHERTHDVI NSLGLTHVSN SRVGGTLSQK QTLSGGELRR
VAIAQELVVD PTTIILDEPT SGLDAHTSWR VFTLLRDLAS HQEKVVVATV HQPSRRVLDN
FHKILVLTQN GRL