Gene OSTLU_38767 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_38767 
Symbol 
ID5001822 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009359 
Strand
Start bp366540 
End bp367379 
Gene Length840 bp 
Protein Length205 aa 
Translation table 
GC content58% 
IMG OID640417243 
Productpredicted protein 
Protein accessionXP_001417998 
Protein GI145347064 
COG category[R] General function prediction only 
COG ID[COG1100] GTPase SAR1 and related small G proteins 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0208811 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACTACG ATCACTTGCT CAAGCTGCTG CTCATCGGTG ATAGCGGTGC GCGCGCGCGC 
GAGGCGAGGC GAGGCGAGGC GAGGCGACGA GAGATGAACT CCGCGCGCGC GTGACCGAAG
CGCGAACGAA CCGCGATGAC TGACGAGAGG ACGCGCGATC GAACGAACGC GCGCAGGCGT
TGGGAAGAGT TGCTTGCTGT TGAGATTTAG CGACGATCAG TTCACGACGA GCTTCATCAC
GACGATCGGG TGCGCGAAGG AATCGTCGGC GCTCGCGAAA CGCGTAAACG ACGTCGACGG
CGCGGTGACT GACCCCGAGA ACCGGTTGTC GATGCGCGAA GGATTGATTT TAAGATTAAA
ACGGTGGAAA TCGATGGGAA GCGGGTGAAG CTGCAGATTT GGGACACCGC CGGACAGGAG
CGCTTTAGGA CGATTACGAC GGCGTATTAT CGCGGCGCGA TGGGGATTTT ACTCGTGTAT
GATGTGTCGG ATGAGAAGAG CTTTGAAAAC GTGCGCGGGT GGATGCGAAA TATTGAGCAG
CACGCAAGCT CGAGTGTGAA CAAGATTTTG ATCGGGAACA AGTGCGACGT GTCGGAGGAG
AAGCGGGCGA TTACGAAGGC TCGCGGGCAG GCGTTGGCAG ATGAATTCGG GATTCCGTTC
TTCGAAACGA GCGCCAAGGC GAGCGTGAAC GTGGAGGACG CATTCATGAC AATCGCGGGC
GATATTAAGA CTCGATTGAC TCGGTTGACT CGGTTGACGG GCTCGAAGGG GGCGATCTCT
GCCGGCGGAA TCAACCTCGG CACCAAGGCG CCGAGCGAAA AGTCCAAGTG TTGCTCCTAA
 
Protein sequence
MHYDHLLKLL LIGDSGVGKS CLLLRFSDDQ FTTSFITTIG IDFKIKTVEI DGKRVKLQIW 
DTAGQERFRT ITTAYYRGAM GILLVYDVSD EKSFENVRGW MRNIEQHASS SVNKILIGNK
CDVSEEKRAI TKARGQALAD EFGIPFFETS AKASVNVEDA FMTIAGDIKT RLTRLTRLTG
SKGAISAGGI NLGTKAPSEK SKCCS