Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_38528 |
Symbol | |
ID | 5001795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009359 |
Strand | + |
Start bp | 692103 |
End bp | 693860 |
Gene Length | 1758 bp |
Protein Length | 585 aa |
Translation table | |
GC content | 54% |
IMG OID | 640417216 |
Product | AE family transporter: anion exchange |
Protein accession | XP_001417844 |
Protein GI | 145346745 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00916191 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGTCCA AGCGAGGCGC CGATTTCACA GGAAAATTTG CTGGGGGTAT TGTGAGCGAT TTCAAGCGAC GATGGGCGGT GTATAAGAGT GATTGGGTCG ATGGATTCAA GGCGCCGACG AAGTGCTTGA GCGCGACGCT CTTCATGTAC TTTGCTTGTC TCGGACCTGC AATCGCGTTC GGGGGGTTGG CGTATAAAGA AACGGACGGG CACGTCGGGG CGATGGAATA TTTGTGCAGC CAAGCGCTCA GTGGGATAAT ATGGGCCGTG TTCTCGGGAC AGCCCGAGAT CGTGCTACGC CCGGCGGGTC CGCAGACGGT GTTCCTCATA GAACTGTTCA AACGATGCAA GGCGTGGAGG ATCGACTTCC TCGTCACGTC TGCGTGGGTC GGGGTTTGGA CTGGGATTTT CATGCTATGT ATTGCCTCAT TCGACGCGTG CGCTTGGGTC GCGAACAAGT GCACAAAGTT TACGCAAGAT ATATTCAGTC TCTTTGTGTG CGCGATTTTC ATCTTTGAAG GATTCAAAAA CTTGTTCACG TACTTTTCAG ACGACAAATA CTCAACCGCA GCCGCTTTGT TTAGCTTGAT GTTAGGTGTC ATGACGTTAC AACTTGGTCT GTGGGCGGTG CATCTTCGCA GTTCGCCGTA TATGAACGCG ACTATTCGTG AACTCACCGC GGATTTTGGT CTGGCCTCCG CCGTCATCAT CGCGAGCGTC ACGGCGAAGC TGTCGAAGAT TTCGGGGCTG GAGCACTTAC AAATTTCAAA CAACTTTGAA CCTTCTATGC AGCGCGATTG GTGGATTGAT TTGGGTTCAG GCGATAAGTT CATCCCCTTG ATTGCAATCT TCCCAGCTCT CATGCTCACG GCGTTGTACT ACGTCGACAT GAACGTGGCG ACATTGCTTT GCAACACGCC GCGCCTGAAG ATGCGTAAGG GCGCGGCTTA TCATTACAAC TTTGCCGTGC TCGCAATATT GGTCTTCATC ACCTCGATGC TCGGACTGCC ACCTCCCACG GGATCGCTGC CGCACTCGCC GCAGTACGTG TTGGCGCTCA GCGACGTAGA AGAGTACACC GTGGACGGCG AGACGCGCAC GAAAGTCATC AAGGTGCATG AACAGCGACT CAGTCCGCTG CTTGTCAACG TTCTCGTAGC TCTGAGCTTC GTCGTGATAC CCGCGCTAAA ATCAATCCCC ATGAGTGTGC TCTTCGGATT GTTCATCTAC ACCGGCATCA TGGGATTGTA CGACAACCAT TTCTGGGAGC GGATCACCAT CGCGTTCATG GAACCGCGCT TGCATCCGCC GACGTCGTAC GTCAGGCACG TACCGCTCAG TCGCGTGCAC GCATTTACGT GCGTACAAAT CGCGTGTGTC GGTGTGCTAT GGGGTATTCG AAGCTCGCCG ATCGCCTTGA CGTTTCCCAT CTTTATTTTA GCGTTGATGC CGCTTCGCAT TTTACTGTTC AAGAAGTTCA ACATGTTTTC GCCGGAATGG CTCGAACTCT TGGACGCAAA GGGCGCAAAA CCGTACGAGG TGGACGAAGA CAACCAAATC ATGGAAGATG GTCGGGAGAA CAAATGGTTG TCCAACACCG GCACGGCGAG CGCTTCGAAT TTCATGGAAT TCGCCGGCTT GCACGAATCC GGTCCCGCAT TCGGCAACGC GGCGTCCTTA CACGCGCACA CGCGTTCCGA CGCGGATGCC ATGATAACAG CGCGAAATCG GATACCACTT ACACCGCTTA CGAAATAA
|
Protein sequence | MASKRGADFT GKFAGGIVSD FKRRWAVYKS DWVDGFKAPT KCLSATLFMY FACLGPAIAF GGLAYKETDG HVGAMEYLCS QALSGIIWAV FSGQPEIVLR PAGPQTVFLI ELFKRCKAWR IDFLVTSAWV GVWTGIFMLC IASFDACAWV ANKCTKFTQD IFSLFVCAIF IFEGFKNLFT YFSDDKYSTA AALFSLMLGV MTLQLGLWAV HLRSSPYMNA TIRELTADFG LASAVIIASV TAKLSKISGL EHLQISNNFE PSMQRDWWID LGSGDKFIPL IAIFPALMLT ALYYVDMNVA TLLCNTPRLK MRKGAAYHYN FAVLAILVFI TSMLGLPPPT GSLPHSPQYV LALSDVEEYT VDGETRTKVI KVHEQRLSPL LVNVLVALSF VVIPALKSIP MSVLFGLFIY TGIMGLYDNH FWERITIAFM EPRLHPPTSY VRHVPLSRVH AFTCVQIACV GVLWGIRSSP IALTFPIFIL ALMPLRILLF KKFNMFSPEW LELLDAKGAK PYEVDEDNQI MEDGRENKWL SNTGTASASN FMEFAGLHES GPAFGNAASL HAHTRSDADA MITARNRIPL TPLTK
|
| |