Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_38080 |
Symbol | |
ID | 5004092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009364 |
Strand | - |
Start bp | 434779 |
End bp | 435441 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | |
GC content | 63% |
IMG OID | 640419513 |
Product | predicted protein |
Protein accession | XP_001420174 |
Protein GI | 145351634 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0131] Imidazoleglycerol-phosphate dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.316246 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.325587 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGCGG CGGAAGGGAT CGACGTGTAC GCGGGCGCCG CCGCGAGCGA GGAGACGCGG CGAAGCGCGA TTCAACGCTC GACGAAGGAG ACGTCCATCG ACGTGAAGCT GGATTTAGAC GCCAGTCGCG ATGACGTCGA GGGATCGAAG ATCAGCACCG GTATCGTCGC CCTCGATGGA TTGTTCACCG CGATTCAACG CGAAGCCGGG GTGGCGCTGA ACATCGCCGC CACGGGAGAC TTGTGGATAG ACGACCACCA CACGGCGGAA GACGTGTCCA TCGCCGTCGG CCAAGCGCTG AACAAGGCGC TGGGGACTAA GAAAGGGTGT AATCGCATGG GGAGCGCGAT GTCCACCGAG GGTGAGGCCA CGGTGGAGTG CGTCATGGAT CTTAGCAATC GCCCGTACTT GGGGTACGGA CTCGAGCTCG AGAGCGACAA AGTGGGCGAC CTCAGCGTGG AGATGGTCGA GCACATGTTC ATGAGTTTGA CGTTCAACGG GCAAATGACG GTGCACTTGG TCGAGCACGC GCGCGGCGCG GACGAAGCCG AAGTTGCCAC AGCCGCGGCG AAGGCTTTCG GTAAGTGCTT GCGACAGTGC GCGGCGATTG ATCCGCGACG CGCGGGCTCC GTGGCGTCGA GCAAAGGTAC GCTCTCTGTG TAG
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Protein sequence | MDAAEGIDVY AGAAASEETR RSAIQRSTKE TSIDVKLDLD ASRDDVEGSK ISTGIVALDG LFTAIQREAG VALNIAATGD LWIDDHHTAE DVSIAVGQAL NKALGTKKGC NRMGSAMSTE GEATVECVMD LSNRPYLGYG LELESDKVGD LSVEMVEHMF MSLTFNGQMT VHLVEHARGA DEAEVATAAA KAFGKCLRQC AAIDPRRAGS VASSKGTLSV
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