Gene OSTLU_37985 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_37985 
SymbolCYN20-3 
ID5003950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009364 
Strand
Start bp591006 
End bp591650 
Gene Length645 bp 
Protein Length214 aa 
Translation table 
GC content62% 
IMG OID640419371 
Productpredicted protein 
Protein accessionXP_001420044 
Protein GI145351351 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGAG TCGAACGCGC GCGAAACGGA CGACGAACGA CGACGACGAC GACGATCAAG 
ATGATGCTCG TCGTCGCGCT GGGCGCGCTG GCGTGCGCGT TCGTCGCGAC GCCGGTGCTC
GCGGAAAAGC GCGCGCCGAA AGTCACCGAT AAGGTGTTCT TCGACGTGAC GATCGACGGT
GAACCCGCGG GGCGAATCGT CATGGGGCTG TACGGGAAGA CGGTGCCGAA GACGGCGGAA
AACTTCAAGC AACTCGCGAC GGGGGAGAAC GGATTCGGGT ACAAAGGCTC GGGATTCCAT
CGAGTGATCA AGAACTTTAT GATTCAGGGT GGTGATTTCA CCAATCACGA CGGCACCGGG
GGGAAGTCGA TCTACGGCGC GCGATTCCCG GATGAAAACT TCAAGCTCAA GCACGAGGGG
CCGGGGACGC TGTCCATGGC CAACGCCGGG CCGGACACGA ACGGGTCGCA GTTTTTCATC
TGCACCGTCA AGACGAGCTG GCTGGACGGC CGACACACCG TCTTCGGGCG CGTGCTCGAG
GGCATGGACG TCGTGACGGC GATCGAAAAC CTCGAGGGGA CGCCGCCGCA AAAGCCGGTG
CTGATTGCCG ACTCGGGCGT CTTACCGATG GACGCCGAAC TTTAA
 
Protein sequence
MTRVERARNG RRTTTTTTIK MMLVVALGAL ACAFVATPVL AEKRAPKVTD KVFFDVTIDG 
EPAGRIVMGL YGKTVPKTAE NFKQLATGEN GFGYKGSGFH RVIKNFMIQG GDFTNHDGTG
GKSIYGARFP DENFKLKHEG PGTLSMANAG PDTNGSQFFI CTVKTSWLDG RHTVFGRVLE
GMDVVTAIEN LEGTPPQKPV LIADSGVLPM DAEL