Gene OSTLU_36889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_36889 
Symbol 
ID5001158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009358 
Strand- 
Start bp137557 
End bp138183 
Gene Length627 bp 
Protein Length209 aa 
Translation table 
GC content58% 
IMG OID640416579 
Productpredicted protein 
Protein accessionXP_001417432 
Protein GI145345890 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3063] Tfp pilus assembly protein PilF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.00688126 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGGCT TGGCCATCTG TCGCGCATTC GCCGGTGATA CCGAGTATGC GCACGCGTTT 
GCGCAACGGA GTGCAAGTCT TACCCTGACA GCGCAGCGGC AGATTACGCT CGGCAATATT 
TTCCTCGCTC AAGGCAAGCT CGCAAAGGCG AGCACGGTGT ACGCGATGGC AATTCGTCGC 
GATCCGGTGA GCGCGGTCGC GCACTTCAAC ATCGGCAACG CGCACTTCTT GGCGGGCGAT 
GCGGCGAGCG CGCGCGTGAG CTATCTCGCC GCGCTCGATC GTGAACCGAA TTACTTCAAG 
GCTTTGTACA ATCTCGCAAT CGTCATCGAC TCCATTGGTT CTGTGGGTGA GGCAAAAGAA 
TGGATGAAAC GCGCCGTCGA CTGCCGTCCG AATGATTCAC GCGCGACGTA CGCCCTCGCG 
CTGTTGTACG TTAAGCTTGG ACAATGGAAG AAAGCCGAAT ATCACTTTGA ACAGACGTTG 
AACCTCGACG CCAAGCACGC TCCGTCGCAA GTTAAGCTCG GGAACTTGGC CTTCAGGCGA 
GGCGACTTCC AGCGCTCCGG GGCGAATTAC CTTAATGCGT TGGAAGTTGA TCCGGGCAAC 
GTCGAGGCGT TGACGAACTT GGCCATG
 
Protein sequence
MHGLAICRAF AGDTEYAHAF AQRSASLTLT AQRQITLGNI FLAQGKLAKA STVYAMAIRR 
DPVSAVAHFN IGNAHFLAGD AASARVSYLA ALDREPNYFK ALYNLAIVID SIGSVGEAKE 
WMKRAVDCRP NDSRATYALA LLYVKLGQWK KAEYHFEQTL NLDAKHAPSQ VKLGNLAFRR 
GDFQRSGANY LNALEVDPGN VEALTNLAM