| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_36377 |
|---|
| Symbol | PRPL3 |
|---|
| ID | 5000528 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009356 |
|---|
| Strand | + |
|---|
| Start bp | 55165 |
|---|
| End bp | 56314 |
|---|
| Gene Length | 1150 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | |
|---|
| GC content | 67% |
|---|
| IMG OID | 640415949 |
|---|
| Product | Plastid ribosomal protein L3, imported to chloroplast, large ribosomal subunit |
|---|
| Protein accession | XP_001416053 |
|---|
| Protein GI | 145341932 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0087] Ribosomal protein L3 |
|---|
| TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAACG CGAAAACGCC CGCGCGTCGA CGCGGGGGGG CGTGCGCGAC GCGCGCGCGC
CTGGACGCGG GCGTGGGGGC GTTCGGGAGC AAGGCTGGGA TGACGCAGGT GTTCACCGAC
GACGGGCTGT GCGTGCCGGT GACCGTGATC GCGGTGCGCG ACGGGAACGT CGTGACGCAG
GTACGGGAAA AATATCGAGC GAACGCGGGA TGGCCGTCGG GGGGTCGGCG CGCGAGGGCG
CGCGAGACGC GGCGAACGAT TCGACCGACG CGCGGGCGCG TGAGGGTTGG ACGACGGGGT
CGATGGATGG GCGCGGCGCG CGCGATGCGT CGACGCGCGC GGCGCGTTCA CGATGGGCGA
ACGATCGGGT GGTGTTATCG TCGATCGCGC GCGCGCGCGA AGGGCTCGGA TGGGGCGGGC
GAGGCGCGAG GAGGACCGAC GCTTCGCGCG CGCGGGGAGA AGCCCTAGGG CGAGGTTACC
GTCGCGACGC GCGGGCGCGG GCGCGACGGA CGGATGCGTT CGGGCGCGGC GTAGAGCGAC
GAAACGCGAA GGAGAGAATC AGAGACTGAC GATATCGCGA TTCGCGCGCG TTCGTGAAAC
ACAGGTGAAG ACTGAGGCGA CGGATGGGTA CAACGCGGTG CAAGTCGGCT ACGACGCCGT
GCGCGACGAC AAGCTCACGA AGCCCGAACT CGGGCACTGC AAGAAGGCGG GCGCGCCGGC
GCTTCGACAC CTCGAAGAGT TCCGTTTGCG CGACGCTCCG ACGTACGAAG TCGGGGCGCA
AATCAAGCCG ACGGAGTTGT TCAAGGAGGG TGATAAGGTT GACGTGCGAG GCCGCACGAT
CGGTAAGGGG TTCCAAGGCG CCGTGAAGCG TTACGGTTTC TCGCGCGGTT TGATGACGCA
CGGTTCTAAA TCGCACCGTC AACACGGTTC CATCGGCAGC GGTACCAACC CGGGTCGCAT
TTACCCGGGT AAGCGCATGC ACGGTCACAT GGGCAACGAG ATGGTGACGA CGAAGGGCTT
AACCGTCGTC TCCGTCGAGG ACGACTGCAT CATCGTCAAG GGCAACGTGC CGGGCAAGAA
GGGCGCTCTG TGCAAGGTGA CGCCCAACAA GAAGGTCGGG GACGCGCGCT GGAGTCCCAC
GTCCGCGTGA
|
|---|
| Protein sequence | MQNAKTPARR RGGACATRAR LDAGVGAFGS KAGMTQVFTD DGLCVPVTVI AVRDGNVVTQ
VKTEATDGYN AVQVGYDAVR DDKLTKPELG HCKKAGAPAL RHLEEFRLRD APTYEVGAQI
KPTELFKEGD KVDVRGRTIG KGFQGAVKRY GFSRGLMTHG SKSHRQHGSI GSGTNPGRIY
PGKRMHGHMG NEMVTTKGLT VVSVEDDCII VKGNVPGKKG ALCKVTPNKK VGDARWSPTS
A
|
|---|
| |