Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_34554 |
Symbol | lhca6 |
ID | 5000759 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009357 |
Strand | - |
Start bp | 802431 |
End bp | 803401 |
Gene Length | 971 bp |
Protein Length | 252 aa |
Translation table | |
GC content | 67% |
IMG OID | 640416180 |
Product | chlorophyll a/b binding, maybe photosystem I light harvesting complex |
Protein accession | XP_001417062 |
Protein GI | 145345103 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.100817 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCTCCC TCACGACGGC TCGACACGCC ATCGCGAACC GCGCGACGAT CGTCGACGCG CGATCGACGA CGCGCGCGCC GCGCGCGCGC GTCGCCGCGC GCGCGGCGAA CGCGGACCGC GAGCTGTGGT ACCCGGGAGC GGTGGCGCCG AAATATCTCG ATGGGACGAT GGCCGGCGAT TACGGTGCGC GACGCGAGCG ACGCGCGAGG ACGCGCGCGA TGGCGGGCGA TGGGAGATAC GATACGGTCG GATACGGCTG GGATGGCGAT TCGAAGGCGG CGGACGCGCG GGGCGGCGGC GCGGGGAGAC GCGCCTACGC GAGCGGAAGA GGGCGGGACG CGGGACGAAT GGAGGCGCGC GTGGATGTGT GACTGACGGA TGCGGTGCGC GCGCAGGCTT TGACCCGTTG CGACTCGGGG CGAACCCGGA GACGCTGCCG TACTTGCAAG AGGCGGAGCT CATGAACGGG CGCTGGGCCA TGGCGGCGAC GGCGGGTATT TTGTTCACCG ACGCGGTTGG TTTGCCGAAG TGGTGGGAAG CCGGTGCCGT GGATTACGGT ATGGACTTCC AACAGCTCGT CGGGTTCCAA GTCGTGGCGA TGAGCATTCT CGAGGCGGCG CGCACGCGCG GTTTCATGAA GTCGGGCGAA TCCGGCGTGT TGAACGCGTT CCCGTTCGAC CCGGCTGGAC TCGATGCTCC GGACAAGCGC GTGAAGGAAG TGAAGAACGC GCGCCTCGCG ATGGTTGCGT TCCTCGGTAT GGTTTCCCAA TACGCCGTCA CCGGTCTCTC CCCGTTGGAG GGCTTGGAGG CGCACATGGC CAACCCGCAA GCCGTCAACT TGTTCACGAG CTCCGTCGGC GGCGAAGCCG TCGCCTTCAT CGCCTTCTTG TCCACCGCCC CGACGTTCTT GCTCGCGCAA AAGACGCTCG GTGACGGCAG CGACGAGGAG TTCCGTCCGA TCCCGTGGTA A
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Protein sequence | MFSLTTARHA IANRATIVDA RSTTRAPRAR VAARAANADR ELWYPGAVAP KYLDGTMAGD YGFDPLRLGA NPETLPYLQE AELMNGRWAM AATAGILFTD AVGLPKWWEA GAVDYGMDFQ QLVGFQVVAM SILEAARTRG FMKSGESGVL NAFPFDPAGL DAPDKRVKEV KNARLAMVAF LGMVSQYAVT GLSPLEGLEA HMANPQAVNL FTSSVGGEAV AFIAFLSTAP TFLLAQKTLG DGSDEEFRPI PW
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