| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_3281 |
|---|
| Symbol | |
|---|
| ID | 5006444 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009373 |
|---|
| Strand | + |
|---|
| Start bp | 87927 |
|---|
| End bp | 88685 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | |
|---|
| GC content | 59% |
|---|
| IMG OID | 640421865 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001422386 |
|---|
| Protein GI | 145356331 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02167] bacterial surface protein 26-residue repeat |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 0.00042278 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.000000386444 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GATTGGAACG TCGGCGACGT GACGAGCATG CGTGACATGT TCTCCGAAAA GGAGGGCTTT
AACGCCGACT TGAGTCGTTG GAACACGAAG TCGGTGACGA CCATGAGTGC CATGTTCAAC
GGCGCGACGA GCTTCAACGG CGACATGCCG AACTGGAACG TCGAGAAGGT GACGCACATG
ACTCACATGT TCCGAGACGC GACGAGCTTC AACGGCGACA TGCCGAACTG GAACGTCGAG
GCGGTGACGA ACATGGCTCA AGTGTTCTCC GGCGCGACGA GCTTCAACGG CGACATCTCG
AACTGGAACC CGAAGGCGGT GACGGGCATG TATCGCACGT TCTACGGCGC GACGAGCTTC
AACGGCGACA TCTCGAACTG GAACGTCGAG GCGGTGAAGG ACATGAGTCA AGTGTTCAAC
GGCGCGACGA GCTTCAACGG CGACATCTCG AACTGGAACG TCGAGGCGGT GACGAGCATG
CGTGACATGT TCTACGGCGC GACGAACTTC AACGGCGACA TCTCAAACTG GAACCCGAAG
GCGGTGAAGG ACATGAATCA AATGTTCCGA GACGCGACGA GCTTCAACGG CGACATCTCC
GCGTGGAACA TCCAAGCCGT TACGGACATG TCTAACATGT TCAACAACGC GCGGGCTTTC
GCGCGAGACA TCACGGGCTG GAACGCGGCG GCGATCGCCG CCGCGCGCGA CGCCACCAAA
GTTTCCGGCA TGTTCAAGAA CGCCACGGCG TGGCGCGCG
|
|---|
| Protein sequence | DWNVGDVTSM RDMFSEKEGF NADLSRWNTK SVTTMSAMFN GATSFNGDMP NWNVEKVTHM
THMFRDATSF NGDMPNWNVE AVTNMAQVFS GATSFNGDIS NWNPKAVTGM YRTFYGATSF
NGDISNWNVE AVKDMSQVFN GATSFNGDIS NWNVEAVTSM RDMFYGATNF NGDISNWNPK
AVKDMNQMFR DATSFNGDIS AWNIQAVTDM SNMFNNARAF ARDITGWNAA AIAAARDATK
VSGMFKNATA WRA
|
|---|
| |