Gene OSTLU_29467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_29467 
Symbol 
ID5006763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009374 
Strand
Start bp289230 
End bp290841 
Gene Length1612 bp 
Protein Length514 aa 
Translation table 
GC content60% 
IMG OID640422184 
Productpredicted protein 
Protein accessionXP_001422543 
Protein GI145356656 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2317] Zn-dependent carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000501593 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0333028 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GACGCTCGCG CGCGCGTTCG CCGTCTCCCG CGCGTCGCTC GCGCCGAGAC GCCGGCGCGC 
GCGCGCGATG GCGACGCGCG AGGCGTCGTA CGACGCGCTC AAGCGCGAGC TCGCGACGCT
GAACGACCTG CGCTCGCTCG AGGGGCTCGC GGGATGGGAC GAACTCGTGA TGATGCCGTC
GGGCGACGGC GCGGCGAACG CGCGCGCGCG CGCGATGGCG ACGCTCGCGG GCGTGATTCA
CGACAAGGCG ACGTCGAAGG CGCTCGGTGC GCTGATCGAG GCGTGCGATG GGACGCCGCG
CGGTAAGGAT GGGACGCTGC GCGGTAAGGA TGGGGCGAAC GTGCGAAGAG CGAAGGAGAG
CTACGCGAAG GCGACGGCGA TTCCGAGCGA GATGGCGAAG AAACGAGCGG AGCTCGGCTC
GCGCGGGTAT CAGACGTGGG TGAAGGCGAG AGAGAGCGGA GAGTACGGCG CGTTCGCGCC
GGTGCTGGAG GAATGGGTGG CGTTGACGAA GGCGCGGTGC GAATTGATCG CGCCGGGCGC
GGACGCGTAC GACGTCGCGT TGGACGACTA CGAGCGAGGG ATGACTTCGG CGCGACTGCG
TGAGATTTTC ACCGTAGTGC GCGAGGGCGT GGTGCCGCTG ATCGAAAAGG TGTACGCGAA
AGATGGTCCA AAGGCGCTGA GAGGACGCGC GAATCCGCTC AGTGGGACGT TTGACGTCGA
TAAGCAGGCT GAACTCGCGA GAGACGTCGC GGTTGCTCTG GGATTTGATT TAACCAAGGG
GCGCTTGGAC GTCAGCGTGC ATCCTTTCAC GGGTGGTTGC GGGCCAGATG ACGTCAGAAT
GACAACGAGG TACAAAGCAG ATGATTTGCT CGAAGGTTTG TCAGGATGCG TGCACGAAGC
CGGTCACAGC GCGTACGAGC AAGGACGCTC AGTCGACTAC CGCGGGCAAC CGGTGAGCGA
AGCGCACTCG ATGGGTGTGC ACGAATCGCA GTCGCTGCTC TGGGAGCGCA TGGTGGCGCT
GAGCGAGCCT TTTGCGCATT TCCTTCTCCC AAAGTTACAA TCGACGTTTC CCGGGAGGTT
CGATGGCGTC ACCGAGGAAG CGCTTTATGC CGGGTACAAC GTCGTGAAGA AGCCGAGCGT
CATTCGCGTC GAATCCGACG AAGTCACCTA TCCCATGCAT GTTATCCTAC GAACGGAATT
GGAGATGGAT TTGTTGAGCG GTAAAATTAC CGTACATGAT TTGCCCAAGC TCTGGAACGC
GAAGATGAAG GAATATCTGA ACGTTGACAT CGAGAACGAC AAACAAGGAG TTTTACAAGA
CGTGCACTGG GGGTCTGGAG CCATCGGCTA CTTCCCGACG TACATAATCG GCCAAATATT
GGCGTGTCAA ATCTTCAACG CCGCCAAACG CTCGATCGAT GATTTGGACG GGCAGATCAA
GCGAGGTGAA TTCGCCCAAC TCTTGGCTTG GTTGCGCGTC AACGTGCACG AGCGCGGATC
AGAGTGCGAC AGCGTAGACG AGTTGATGAT GAAAGTCACA GGCAAGCCGC TCGATGCGGC
AGAATTCGTG ACTTATTTGA CTGAAAAGTA CACCAAGCTC TATGATCTTT GA
 
Protein sequence
MATREASYDA LKRELATLND LRSLEGLAGW DELVMMPSGD GAANARARAM ATLAGVIHDK 
ATSKALGALI EACDGTPRGK DGTLRGKDGA NVRRAKESYA KATAIPSEMA KKRAELGSRG
YQTWVKARES GEYGAFAPVL EEWVALTKAR CELIAPGADA YDVALDDYER GMTSARLREI
FTVVREGVVP LIEKVYAKDG PKALRGRANP LSGTFDVDKQ AELARDVAVA LGFDLTKGRL
DVSVHPFTGG CGPDDVRMTT RYKADDLLEG LSGCVHEAGH SAYEQGRSVD YRGQPVSEAH
SMGVHESQSL LWERMVALSE PFAHFLLPKL QSTFPGRFDG VTEEALYAGY NVVKKPSVIR
VESDEVTYPM HVILRTELEM DLLSGKITVH DLPKLWNAKM KEYLNVDIEN DKQGVLQDVH
WGSGAIGYFP TYIIGQILAC QIFNAAKRSI DDLDGQIKRG EFAQLLAWLR VNVHERGSEC
DSVDELMMKV TGKPLDAAEF VTYLTEKYTK LYDL