Gene OSTLU_28783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_28783 
Symbol 
ID5000061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009355 
Strand
Start bp302164 
End bp303090 
Gene Length927 bp 
Protein Length308 aa 
Translation table 
GC content59% 
IMG OID640415482 
Productpredicted protein 
Protein accessionXP_001415448 
Protein GI145340680 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 
TIGRFAM ID[TIGR02143] tRNA (uracil-5-)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.281559 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGGACA GAGGCGCGCC GACGGTGATG GTGGATGATT TTCCCATGGC GCGACGGGCG 
ATCCGAGACG TGATGGGGCG ATTGCTGCGC GAGGCGAGCG CGGTGGCGGC GCTGCGGGAC
GGGCTCGAGG CGACGCACTT TTTGTGCGGC GTCGCCGAAG GCAAGGTGTT GGCGACGCTC
GTGTACTCGA CACCGATCAA CGTCGACGCG TGGACGCTCG CGGCGCGTCG TTTACTCGCG
ACGAAGTTCG ACGACGTGTC GCTCGAACTC ATGGGACGAT GCAAGGGCGT CGTCGCGAAG
ACGGGGGATG ATTTCGTGTG GGAAGAGTAC GAGCTCGGCG ACGGTTCGGT GTTGACTTAC
AAACACACCG AGGGCGCTTT TTCGAATCCT AATCGAACGA TCACGATCGC CACGATGGAG
TTCTTGCGCG ATGCGGCGAA GAAGAAGTTC TCGAGGCGAA AGATGCTACT AGAGCTGTAT
TGCGGCAACG CGAATCATAC GTGCGCGCTC GCGAATTTGT ACGAGCGCGT TGTCGCGGTT
GAAGTAAACC CCGTTTTAGT CGATGCCGCG CGAGAGAGTC TGGACATGAA CTCGGTGTCG
AACGTCGATA TAATTTTGAG TCCGAGCGAG AGCGTCGCCA AAAGTTTGCT GCGCGGAAAG
TTCAAAGACG CAGCCGGCGC TACGATTCGC GTCGAAGACT TTGACGCCGT CCTCGTCGAT
CCACCTCGAG CGGGTCTCGA CGCCGACACG TTGGCGCTCG TGTCCCAGAT CGATCACGTG
CTGTACGTGT CGTGTGGACC TGAAAACTTG CTCGCCAACA TCAGGGATGG ACTGGACGCA
ACACACGCGG TCGACGATTT CATAGTATTG GATCATTTCC CGTGGACGCG ACACATCGAA
GTCGCCGTAT CCATGCGCAA GCGTTAG
 
Protein sequence
MWDRGAPTVM VDDFPMARRA IRDVMGRLLR EASAVAALRD GLEATHFLCG VAEGKVLATL 
VYSTPINVDA WTLAARRLLA TKFDDVSLEL MGRCKGVVAK TGDDFVWEEY ELGDGSVLTY
KHTEGAFSNP NRTITIATME FLRDAAKKKF SRRKMLLELY CGNANHTCAL ANLYERVVAV
EVNPVLVDAA RESLDMNSVS NVDIILSPSE SVAKSLLRGK FKDAAGATIR VEDFDAVLVD
PPRAGLDADT LALVSQIDHV LYVSCGPENL LANIRDGLDA THAVDDFIVL DHFPWTRHIE
VAVSMRKR