Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_28535 |
Symbol | |
ID | 5006428 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009373 |
Strand | + |
Start bp | 34720 |
End bp | 37072 |
Gene Length | 2353 bp |
Protein Length | 433 aa |
Translation table | |
GC content | 61% |
IMG OID | 640421849 |
Product | Amt family transporter: ammonium |
Protein accession | XP_001422370 |
Protein GI | 145356298 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0004] Ammonia permease |
TIGRFAM ID | [TIGR00836] ammonium transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 57 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | CCGCATTCCT CGACGCCGAG CTCGTCGGTT TCGCGCGCGC ACGCTCGAAC CGCGACCGCG AAACGAAAGA ATATATAATC TCTCATCATG GGTGCGTGCG CGATGCGCGA TAGCGACGTC GTCGGTGCCG CGAACGAGGC GACGATCAGA GACGATTCGA CGACGCATTC GAATGCGCGC GAAGCGACGC GGCGCGAAGC GACGCGGCGC GCGGTCGCGC GCGACGATCG GCGACGGCGA GTGATGGTTG GAAAAGTTTT ACATCGTTTG TGGCGCGCGC GGGGGGCGTC GCGTCGTCGC GGGCGCGGAG AGGACGGACG CGGTCGAGGG GGACGACGCG ACCCGCAATT CGACGAGCTG GGGCGGGTCG GTTGATTGAG GGTTGAAGTG GGATTACACT GTTTACGCAT ACGCGCTCGG GTGACTGACG AAGACGCGAA TCGCGCGCGC GCAGCTGTTG GTGATGACGT CGATATCAAC TTTATGCTGA CGAACACCTT CTTGGTGTTC TTCATGCAAG CCGGCTTCGC GATGTTGTGC GCCGGATCCG TGCGAAGCAA GAACACGAAG AACATTTTGA TTAAAAACGT GCTCGACGCG TGCGTCGGCG CCATCGCGTG GTTCTTGTTT GGCTACGGTT TCGCGTTCGG GGCGACGACC GGAAAGAAGG AAAACGCGTT CATCGGTTCC GGTAACTTCG CGATGAAGGA CGTCACCACT GCGAGCGAAT TGGCGATGTA CTTGTTCCAG TGGTCGTTCT CCGCTGCGGC GACGACGATC GTGTCTGGCT CTGTCGCCGA ACGCACCAAG TTCGAGGCGT ACCTCGGCTA CTCTTTCTTC CTCACCGCCT TCGTGTACCC GGTCGTCGTG CACTGGACCT GGAGTGGTGG CGCGGGCTGG TTGGGCACTG GCTACACTTT GGGCGACAAG GTCGCTGACG TTGGCATGCA CGACTTCGCC GGCTCTGGCG TCGTCCACAT GGTTGGTGGT TTCGCTGGTT TGATGGGCGC CATGATCGTC GGTCCGCGCA CCGGTCGCTT TGCTTCCGAT GGTCGCGTGA ACCCGATGCC GGGCCACTCC GCCCCGCTCG TCGTTCTCGG CACCTTCGTC CTCTGGCTCG GCTGGTACGG CTTCAACCCG GGCTCCGCGG GCGGCGTCGT CGACAACGCT GAAACTGTGG CCCGCTGTGC CATCACCACG ACGCTCTCCG CCGCCGCTGG TGGTGTGACA GCCATGCTCT TGAACTACAA GTTGTACCAC GTCTGGGACT TGATCGCCGT GTGCAACGGT GTTCTCGCGG GTCTCGTCTC CATCACCGCC GGTTGCGCCG TCACGGAACC GTGGGCCGCC CTCGTCTGCG GTTCGCTCGG CGCCCTCGTC ATTCACTTCT CCTCCAAGCT CTTGCTCAAG TTCCAAATCG ACGATCCGCT CGAAGCGGCG CCGATGCACG GCTTCTGCGG CGCCTTCGGC GTTCTCTGGG TCGGTTTCAT GGCCAAGAAG GAATACGCCG AGGCTCAGGG TGCCAGAGCT GGTGCGTTTT ACGAAGGTGG CGGCAAGCAA CTCGGCGCGC AAATCGTCGG TATCCTCGTC ATCATCGCGT GGACGTGCGG CACCATTGGT CCCTTCTTCA TGTTGATGAA GAAGTTCAAC TTGCTCCGCA CCACCGTCGA AGAAGAGACG CTCGGCTTGG ACGAATCCAA GCACGGCGGC AAGGCGTACG CGCTGGAACT CGTCGCTCCG GAACCAGCGT AAACGTGCGC TCCACGGGTT GAACGAACGT ATCGTCGGTC AGAAATTTTC TGAGCACGTA CATCCCGCTC GTTTCTGCGA AGAAGGCGCT CGTACGCACG CGTTCGCGCG TCTCTTTTTC ACTCTTAACC ATCACAAAAC AGATTCACCT TCCTCTTTTG TAAAACCGAT GATTACTATA CCTATTATTA TTACACCTCG ATCACCACGC GAAACGTTCG ATCACGTGCG TCGGCGTCGC ATCGGGATGC TCTCGCAGAA CGTCCTCGAG CGCTCGAAGC TTCAACTCCG CGGCGTGAAC GCCCACTCCT CGCACGAACA CCGTGTCCAC GCCCGCGCGC GCGCCGCCGG CGACGTCGTG CGCCAACGAG TCTCCGACGG CGACGACGCG CGATTTATCC AAATCGCCGC CGGCGGCTTT GATTTCCCAC AGCAACTCTT CGTAAATGAT GGACGACGGC TTCCCCATCA AACACACGTA CGCCTCGCCG TCCTCGCCCG CGTGCGTGGC GTTGAATTTA TCGACGTAAT ATCTCGCGAG CGTCCCCGGC ATGGCGACGA GCGTCTCGCC CGAAACCGTC ACGAAATCCG GATTCGCGAC GCA
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Protein sequence | MAVGDDVDIN FMLTNTFLVF FMQAGFAMLC AGSVRSKNTK NILIKNVLDA CVGAIAWFLF GYGFAFGATT GKKENAFIGS GNFAMKDVTT ASELAMYLFQ WSFSAAATTI VSGSVAERTK FEAYLGYSFF LTAFVYPVVV HWTWSGGAGW LGTGYTLGDK VADVGMHDFA GSGVVHMVGG FAGLMGAMIV GPRTGRFASD GRVNPMPGHS APLVVLGTFV LWLGWYGFNP GSAGGVVDNA ETVARCAITT TLSAAAGGVT AMLLNYKLYH VWDLIAVCNG VLAGLVSITA GCAVTEPWAA LVCGSLGALV IHFSSKLLLK FQIDDPLEAA PMHGFCGAFG VLWVGFMAKK EYAEAQGARA GAFYEGGGKQ LGAQIVGILV IIAWTCGTIG PFFMLMKKFN LLRTTVEEET LGLDESKHGG KAYALELVAP EPA
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