Gene OSTLU_28420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_28420 
Symbol 
ID5006368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009372 
Strand
Start bp3158 
End bp4479 
Gene Length1322 bp 
Protein Length296 aa 
Translation table 
GC content55% 
IMG OID640421789 
Producthypothetical protein 
Protein accessionXP_001422280 
Protein GI145356106 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3774] Mannosyltransferase OCH1 and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CTAGGCCCGA TTGATCACAA TTTATCAGGT ATATCTCGCA GAATCTGTCA TTTATTATCA 
GGTGGAGGCA GCCAGATCAC GCTGGTACAC TGGTACCGAA AAAGCCTTCA GCAGGTGCTG
CGGGCCTCTA GCCGGCGTTG CATTGTCGCC CATCCTACCG CGTTGCACTG GTCGCTGTGA
GCCGTCCGTG CGCGCGCCCA CAGGTGTGCC GGTGGAATAA CACCGATACC TTACCGACAC
ACGTGCTCAT CGATGTCGTC GCACGTAAAG AGCTTTTATT AAGACGAGTC GGCTGATTCT
GCAACTCGCG GAACGAAACG TTTCGCGCAC GAACGAGGGC TTTTTCGTCG CGAATTTCTC
ATCGCGCGGA ATGAAACGCG GAGGCGTTCG GAACAAGCTG TGCTCAACCA ATCGGCGAGT
TGATCGTTGC AATAAGGCAT GGACGCTCGC GCTGGTACCT TTCGCAACCA CCTCAATTCT
GCTTCTTTTG CTTCACGCGT CGCGGCGAGG TATACAAAGT CATTGGAACG ACGCAACAGT
GCCGGCGTTT CCGATGACTA CGAATGGCGA AAACACAATG TCTGCTTTGC CTCACACATT
GCACACCCTG ACGTTACCGA ACGATTCGTC GTTCGCGTTA AAAATCACCA CGCGACTCAA
CCCGACGTGG ACGGTGAAGA CGTACGACGC GTACGGCGGA GCCGAGTATA TGGAAACGAA
CTGCAAAAAA TATTCACGCG CGTACAGAGC ACTAAAACCA CTCGCGTTCA AAGCTGATTT
ATTGCGGTAC TGCATTCTGT ACACCGAAGG CGGCGCTTGG ATGGACGACG ACATTTTACT
GGTGAAGTCT CTCGACGAAT TGACCCACGA TATGCGCCAC GACGCGTTGT TCGTGTACGA
CAGACGCGTG TACAAACTCG CGGGCGGGCC GAAACAAGTG TGGAACGCGT TCATGGTGGC
GGTTCCCGGG TTGGACGTTT TCGCGCGCGC GATGGAGAAG ATCGCCGCGA ACGTCGCCGA
CCGACGACAC TTTTATCATT CGTTGTACTA CACCGGGCCC GCGTTGCTCT ACGAAAGCAT
CGCGGATGGA GATTCGATCG AGTTTCGTTG GCGCGTGCAA CATAGAGACG CGCTGAGCGC
GGCGAGTCGA CGCGTCGCGG ACGTGCGCAC GGACGAGGAG GTGTTGTTGC ACTTTAAGCT
GCCTCGAGCG ACGAAGCACT ACAGCGAAAT GTCGCGGGGA GGGGACATTT ACGCGTCGTG
AAGAAGTCGG CGGAAACGAT TTGGCGCGAT CGATCGTACG TAGATTCTAG CTCAACGTGT
AG
 
Protein sequence
MKRGGVRNKL CSTNRRVDRC NKAWTLALVP FATTSILLLL LHASRRGIQS HWNDATVPAF 
PMTTNGENTM SALPHTLHTL TLPNDSSFAL KITTRLNPTW TVKTYDAYGG AEYMETNCKK
YSRAYRALKP LAFKADLLRY CILYTEGGAW MDDDILLVKS LDELTHDMRH DALFVYDRRV
YKLAGGPKQV WNAFMVAVPG LDVFARAMEK IAANVADRRH FYHSLYYTGP ALLYESIADG
DSIEFRWRVQ HRDALSAASR RVADVRTDEE VLLHFKLPRA TKHYSEMSRG GDIYAS