Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_28310 |
Symbol | DAD1 |
ID | 5006285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009371 |
Strand | - |
Start bp | 196749 |
End bp | 198239 |
Gene Length | 1491 bp |
Protein Length | 471 aa |
Translation table | |
GC content | 66% |
IMG OID | 640421706 |
Product | Diaminopimelate decarboxylase |
Protein accession | XP_001422228 |
Protein GI | 145355995 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.0114023 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00277036 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | CCGACGCGCG CGCCGACGAC GAAAGCGCTC GCTCGAGACG GCATGCGCGC GACCGCGACG GCGCCGCGCG TCGCGACGGC GCGCGCGCGA CGCGATCGCG CGACGCGCGC GACGGGACGA TGGACGCGCG CGCGCACCGC GACGGCGCCG CGCGCGCGCC TCGGCGCGCG CTCGAGCGCG AGCGCGGTGG AGACGCTGCG GTTCCTGACG CCCGAGGACG CGCGCGACGT GGCGGAGACG CACGGGACGC CGACGTACGT GTACGACCGC GCGACGCTGG ACGCGCAGGC GGCGCGGGCG AGGGCGTTTC CGAACGCGTA CGGATTGACG GTGCGGTACG CGATGAAGGC GAGCCCGAAC GCGGCGATCC TGAAGACGTT TAAAAAGGCT GGCCTGCACG TCGACGCGTC GAGCGGATAC GAGTGCGAGC GAGCGATGAA GGCGGGATTC GAGGGGGGGG AGATCTCGCT GTCGACGCAA GAGCTGCCGA GGTTTTTCGA GGATTTGGTG CGACGCGGGG TGAAGGTGAA CGCGTGCTCG CTGGATCAGT TGGAACGATT CGGAAGGGCG TTCCCGGGAG GGGAGGTCGG CGTGCGGTTT AACCCGGGGC TGGGCAGCGG CGGGACGGGG AAGACGAACG TGGGGGGGCC GAGCTCGTCG TTCGGGATTT GGTTCGAGTC TCTGCCGCGA GTGAAGGAAA TCGTGGAGCA GTACGACTTG AAGGTCGTGC GCGTGCACAC GCACATCGGA AGCGGAAGCG ATCCGGCGGT GTGGCAAAAG GTGAGCGGGA TGTCCTTGGA TTTGTGCCGA GAGTTTCCGA GCGTCGACAC GCTCAACCTG GGCGGCGGCT ACAAGGTCGG GCGGATGTCG TACGAAAAGT CCACCGATCT CGCCGTCGTC GGCGTGCCGG TGAAAGAAGC GTTCGAAGCG TTCGCGAAGG AGACCGGACG TAAGTTAAAG CTCGAAATCG AGCCCGGTAC GTTTTTGTTG GCCAACTCGT GCGCCGTCGT CACCTCGGTG CAAGACAAGG TCGTCACCGG CACCGCCGAA GGGCACACGT TCTTGAAACT CGACATGGGT ATGACCGAAG TCTTACGCCC GAGCTTGTAC GGCTCTCAGC ACCCGCTGGT GTCGGTGAGC AAGGCTGGCG AATTGCCCGC CGCGCAAGCC GATTACGTCG TCGTCGGGCA CTGCTGCGAA TCCGGAGATT TGCTCACCCC GGCCCCGGAC GAGCCGGAGA CCATCTCCGA GCGTCGCATG GGCGAAGTCA ACATCGGCGA TTACGTCGTC ATCGAGGGGT CCGGCGCCTA CTGCGCCGGC ATGAGTTCCA AGAACTACAA CTCCTTCCCC GAGGCTCCCG AAGTCATGCG ACTCGCCGAC GGCGCCGGTT TCGCCGTCAT TCGTCGCAAG CAAACCCTCG AGCAAATCCT CGCCAACGAG GTCGATTTCA CCGCGTGATC ACTTCGTCGC GCTCGTTCAC CGTCGCACGC C
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Protein sequence | MRATATAPRV ATARARRDRA TRATGRWTRA RTATAPRARL GARSSASAVE TLRFLTPEDA RDVAETHGTP TYVYDRATLD AQAARARAFP NAYGLTVRYA MKASPNAAIL KTFKKAGLHV DASSGYECER AMKAGFEGGE ISLSTQELPR FFEDLVRRGV KVNACSLDQL ERFGRAFPGG EVGVRFNPGL GSGGTGKTNV GGPSSSFGIW FESLPRVKEI VEQYDLKVVR VHTHIGSGSD PAVWQKVSGM SLDLCREFPS VDTLNLGGGY KVGRMSYEKS TDLAVVGVPV KEAFEAFAKE TGRKLKLEIE PGTFLLANSC AVVTSVQDKV VTGTAEGHTF LKLDMGMTEV LRPSLYGSQH PLVSVSKAGE LPAAQADYVV VGHCCESGDL LTPAPDEPET ISERRMGEVN IGDYVVIEGS GAYCAGMSSK NYNSFPEAPE VMRLADGAGF AVIRRKQTLE QILANEVDFT A
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